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卢氏鸡蓝蛋壳中启动子区域CpG位点甲基化状态、RNA表达与蛋壳颜色变化之间的关联

Association Between the Methylation Statuses at CpG Sites in the Promoter Region of the , RNA Expression and Color Change in Blue Eggshells in Lushi Chickens.

作者信息

Li Zhuanjian, Ren Tuanhui, Li Wenya, Zhou Yu, Han Ruili, Li Hong, Jiang Ruirui, Yan Fengbin, Sun Guirong, Liu Xiaojun, Tian Yadong, Kang Xiangtao

机构信息

College of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, China.

Henan Innovative Engineering Research Center of Poultry Germplasm Resource, Zhengzhou, China.

出版信息

Front Genet. 2019 Feb 26;10:161. doi: 10.3389/fgene.2019.00161. eCollection 2019.

DOI:10.3389/fgene.2019.00161
PMID:30863430
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6399514/
Abstract

The formation mechanism underlying the blue eggshell characteristic has been discovered in birds, and is the key gene that regulates the blue eggshell color. Insertion of an endogenous retrovirus, EAV-HP, in the 5' flanking region promotes expression in the chicken shell gland, and this expression causes bile salts to enter the shell gland, where biliverdin is secreted into the eggshell, forming a blue shell. However, at different laying stages of the same group of chickens, the color of the eggshell can vary widely, and the molecular mechanism underlying the eggshell color change remains unknown. Therefore, to reveal the molecular mechanism of the blue eggshell color variations, we analyzed the change in the eggshell color during the laying period. The results indicated that the eggshell color in Lushi chickens can be divided into three stages: 20-25 weeks for dark blue, 26-45 weeks for medium blue, and 46-60 weeks for light blue. We further investigated the expression and methylation levels of the gene at eight different weeks, finding that the relative expression of was significantly higher at 25 and 30 weeks than at other laying weeks. Furthermore, the overall methylation rate of the gene in Lushi chickens increased gradually with increasing weeks of egg production, as shown by bisulfite sequencing PCR. Pearson correlation analysis showed that methylation of the promoter region of was significantly negatively correlated with both expression in the shell gland tissue and eggshell color. In addition, we predicted that CpG5 and CpG8 may be key sites for regulating gene transcription. Our findings show that as the level of methylation increases, methylation of the CpG5 and CpG8 sites hinders the binding of transcription factors to the promoter, reducing expression during the late period and resulting in a lighter eggshell color.

摘要

鸟类中已发现蓝蛋壳特征的形成机制,且相关基因是调控蓝蛋壳颜色的关键基因。内源性逆转录病毒EAV - HP插入5'侧翼区域可促进其在鸡壳腺中的表达,这种表达促使胆汁盐进入壳腺,胆绿素在此处分泌到蛋壳中,从而形成蓝色蛋壳。然而,同一组鸡在不同产蛋阶段,蛋壳颜色差异很大,蛋壳颜色变化的分子机制仍不清楚。因此,为揭示蓝蛋壳颜色变化的分子机制,我们分析了产蛋期蛋壳颜色的变化。结果表明,卢氏鸡的蛋壳颜色可分为三个阶段:20 - 25周为深蓝色,26 - 45周为中蓝色,46 - 60周为浅蓝色。我们进一步研究了该基因在八个不同周龄的表达和甲基化水平,发现其相对表达在25周和30周时显著高于其他产蛋周龄。此外,亚硫酸氢盐测序PCR显示,卢氏鸡中该基因的总体甲基化率随产蛋周数增加而逐渐升高。Pearson相关性分析表明,该基因启动子区域的甲基化与壳腺组织中的表达及蛋壳颜色均呈显著负相关。此外,我们预测CpG5和CpG8可能是调控该基因转录的关键位点。我们的研究结果表明,随着甲基化水平的升高,CpG5和CpG8位点的甲基化阻碍转录因子与启动子的结合,降低后期的表达,导致蛋壳颜色变浅。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/63bf88e9b049/fgene-10-00161-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/b48c9e5c19db/fgene-10-00161-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/a58a767e2b06/fgene-10-00161-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/fbf233c9f28f/fgene-10-00161-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/a9f7ced5182a/fgene-10-00161-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/216c3afd7fbf/fgene-10-00161-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/6f08588a8320/fgene-10-00161-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/63bf88e9b049/fgene-10-00161-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/b48c9e5c19db/fgene-10-00161-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/a58a767e2b06/fgene-10-00161-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/fbf233c9f28f/fgene-10-00161-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/a9f7ced5182a/fgene-10-00161-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/216c3afd7fbf/fgene-10-00161-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/6f08588a8320/fgene-10-00161-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3787/6399514/63bf88e9b049/fgene-10-00161-g007.jpg

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