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基于深度学习的利用卷积神经网络对黄瓜白粉病进行分割与量化

Deep Learning-Based Segmentation and Quantification of Cucumber Powdery Mildew Using Convolutional Neural Network.

作者信息

Lin Ke, Gong Liang, Huang Yixiang, Liu Chengliang, Pan Junsong

机构信息

School of Mechanical Engineering, Shanghai Jiao Tong University, Shanghai, China.

School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.

出版信息

Front Plant Sci. 2019 Feb 15;10:155. doi: 10.3389/fpls.2019.00155. eCollection 2019.

Abstract

Powdery mildew is a common disease in plants, and it is also one of the main diseases in the middle and final stages of cucumber (). Powdery mildew on plant leaves affects the photosynthesis, which may reduce the plant yield. Therefore, it is of great significance to automatically identify powdery mildew. Currently, most image-based models commonly regard the powdery mildew identification problem as a dichotomy case, yielding a true or false classification assertion. However, quantitative assessment of disease resistance traits plays an important role in the screening of breeders for plant varieties. Therefore, there is an urgent need to exploit the extent to which leaves are infected which can be obtained by the area of diseases regions. In order to tackle these challenges, we propose a semantic segmentation model based on convolutional neural networks (CNN) to segment the powdery mildew on cucumber leaf images at pixel level, achieving an average pixel accuracy of 96.08%, intersection over union of 72.11% and Dice accuracy of 83.45% on twenty test samples. This outperforms the existing segmentation methods, K-means, Random forest, and GBDT methods. In conclusion, the proposed model is capable of segmenting the powdery mildew on cucumber leaves at pixel level, which makes a valuable tool for cucumber breeders to assess the severity of powdery mildew.

摘要

白粉病是植物中的常见病害,也是黄瓜生长中后期的主要病害之一。植物叶片上的白粉病会影响光合作用,可能导致作物减产。因此,自动识别白粉病具有重要意义。目前,大多数基于图像的模型通常将白粉病识别问题视为二分类问题,给出真或假的分类判断。然而,抗病性状的定量评估在植物品种育种筛选中起着重要作用。因此,迫切需要利用病害区域面积来获取叶片的感染程度。为应对这些挑战,我们提出了一种基于卷积神经网络(CNN)的语义分割模型,用于在像素级别分割黄瓜叶片图像上的白粉病,在20个测试样本上实现了平均像素准确率96.08%、交并比72.11%和Dice准确率83.45%。这优于现有的分割方法,如K均值、随机森林和梯度提升决策树(GBDT)方法。总之,所提出的模型能够在像素级别分割黄瓜叶片上的白粉病,这为黄瓜育种者评估白粉病的严重程度提供了一个有价值的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d03/6413718/c62a32f8489d/fpls-10-00155-g002.jpg

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