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微小RNA功能分析。

Analysis of microRNA functions.

作者信息

Remsburg Carolyn, Konrad Kalin, Sampilo Nina Faye, Song Jia L

机构信息

Department of Biological Sciences, University of Delaware, Newark, DE, United States.

Department of Biological Sciences, University of Delaware, Newark, DE, United States.

出版信息

Methods Cell Biol. 2019;151:323-334. doi: 10.1016/bs.mcb.2018.10.005. Epub 2018 Dec 11.

DOI:10.1016/bs.mcb.2018.10.005
PMID:30948016
Abstract

MicroRNAs (miRNAs) are small non-coding RNAs that repress the translation and reduce the stability of target mRNAs in animal cells. Post-transcriptional regulation mediated by miRNAs is a highly conserved mechanism utilized by organisms throughout phylogeny to fine tune gene expression. We document the approaches used to study the function of a single miRNA and miRNA regulation of biological pathways in the sea urchin embryo. The protocols that are described include selection of miRNA inhibitors, test of miRNA direct targets, and the use of target protector morpholinos to evaluate the impact of miRNA inhibition on its targets. Using the described techniques and strategies, the sea urchin researcher will be able to validate a miRNA's direct targets and evaluate how inhibition of the miRNA affects developmental processes. These results will contribute to our understanding of the regulatory roles of miRNAs in development.

摘要

微小RNA(miRNA)是一类小的非编码RNA,可在动物细胞中抑制靶mRNA的翻译并降低其稳定性。由miRNA介导的转录后调控是一种高度保守的机制,生物体在整个系统发育过程中都利用该机制来微调基因表达。我们记录了用于研究单个miRNA功能以及海胆胚胎中生物途径的miRNA调控的方法。所描述的方案包括miRNA抑制剂的选择、miRNA直接靶标的测试,以及使用靶标保护吗啉代寡核苷酸来评估miRNA抑制对其靶标的影响。使用所描述的技术和策略,海胆研究人员将能够验证miRNA的直接靶标,并评估miRNA抑制如何影响发育过程。这些结果将有助于我们理解miRNA在发育中的调控作用。

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本文引用的文献

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Development. 2018 Nov 30;145(23):dev167130. doi: 10.1242/dev.167130.
2
Comparing two approaches of miR-34a target identification, biotinylated-miRNA pulldown vs miRNA overexpression.比较两种 miR-34a 靶标鉴定方法,生物素化 miRNA 下拉与 miRNA 过表达。
RNA Biol. 2018 Jan 2;15(1):55-61. doi: 10.1080/15476286.2017.1391441. Epub 2017 Nov 9.
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Tools for Sequence-Based miRNA Target Prediction: What to Choose?
microRNA-1 通过直接靶向骨骼生成基因和调节信号通路的组成部分来调节海胆骨骼生成。
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Identification and Functional Verification Reveals that miR-195 Inhibiting to Affect Fat Deposition in Xinyang Buffalo.鉴定与功能验证表明miR-195抑制作用影响信阳水牛脂肪沉积。
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miR-103-3p targets Ndel1 to regulate neural stem cell proliferation and differentiation.微小RNA-103-3p靶向Ndel1以调节神经干细胞的增殖和分化。
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Mesenchymal stem cell-derived exosomes containing miR-145-5p reduce inflammation in spinal cord injury by regulating the TLR4/NF-κB signaling pathway.间充质干细胞来源的包含 miR-145-5p 的外泌体通过调节 TLR4/NF-κB 信号通路减少脊髓损伤中的炎症反应。
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microRNA-31 regulates skeletogenesis by direct suppression of Eve and Wnt1.微小RNA-31通过直接抑制Eve和Wnt1来调节骨骼生成。
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