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新种金色热芽胞菌和黏土热芽胞菌,属于Ktedonobacteria纲,以及对热芽胞菌属的修订描述

Thermogemmatispora aurantia sp. nov. and Thermogemmatispora argillosa sp. nov., within the class Ktedonobacteria, and emended description of the genus Thermogemmatispora.

作者信息

Zheng Yu, Wang Chiung-Mei, Sakai Yasuteru, Abe Keietsu, Yokota Akira, Yabe Shuhei

机构信息

1​Graduate School of Agricultural Sciences, Tohoku University, 468-1 Aramaki Aza Aoba, Aobaku, Sendai 980-0845, Japan.

2​Hazaka Plant Research Center, Kennan Eisei Kogyo Co., Ltd., 44 Aza-Inariyama, Oaza-Ashitate, Murata-cho, Shibata-gun, Miyagi 989-1311, Japan.

出版信息

Int J Syst Evol Microbiol. 2019 Jun;69(6):1744-1750. doi: 10.1099/ijsem.0.003388. Epub 2019 Apr 4.

DOI:10.1099/ijsem.0.003388
PMID:30950784
Abstract

Two thermophilic, aerobic, Gram-stain-positive Ktedonobacteria strains, A1-2 and A3-2, were isolated from geothermal soil in Japan. The strains formed orange-coloured colonies on 10-fold diluted Reasoner's 2A medium, followed by formation of branched aerial mycelium with multiple grape-like spores. Both strains hydrolysed casein, carboxymethyl cellulose, starch, chitin and xylan, but did not liquify gelatin. Strain A1-2 utilised sucrose and gellan gum and was inhibited by inositol, while strain A3-2 utilised only gellan gum and was not inhibited by inositol. The DNA G+C contents of strain A1-2 and A3-2 were 63.2 and 63.1 mol%, respectively. Chemotaxonomic data (major fatty acid, iso-C17 : 0; major menaquinone, MK-9(H2); cell-wall amino acids, ornithine, serine, glycine, glutamic acid, alanine and β-alanine; polar lipids, phosphatidylinositol, phosphatidylglycerol, diphosphatidylglycerol, one unidentified lipid, one unidentified phosphoglycolipid and three unidentified glycolipids; major cell-wall sugars, mannose, arabinose and xylose) indicate that both strains belong to the genus Thermogemmatispora. 16S rRNA gene sequence analysis indicated that strain A1-2  was most closely related to the type strains of Thermogemmatispora onikobensis (97.7 % sequence similarity), and that strain A3-2 was most closely related to the type strains of Thermogemmatispora carboxidivorans(97.2%), but DNA-DNA hybridization shows relatedness values of <67 % with previously described type strains. Moreover, 16S rRNA gene sequence similarity and DNA-DNA relatedness between strain A1-2 and strain A3-2 were 96.0 and 33.4%, respectively, suggesting that the two strains are genetically distinct. The two strains are proposed as Thermogemmatispora aurantia sp. nov. and Thermogemmatispora argillosa sp. nov.

摘要

从日本的地热土壤中分离出两株嗜热、需氧、革兰氏染色阳性的Ktedonobacteria菌株,A1-2和A3-2。这些菌株在10倍稀释的Reasoner's 2A培养基上形成橙色菌落,随后形成带有多个葡萄状孢子的分支气生菌丝体。两株菌株均能水解酪蛋白、羧甲基纤维素、淀粉、几丁质和木聚糖,但不液化明胶。菌株A1-2利用蔗糖和结冷胶,被肌醇抑制,而菌株A3-2仅利用结冷胶,不被肌醇抑制。菌株A1-2和A3-2的DNA G+C含量分别为63.2和63.1 mol%。化学分类学数据(主要脂肪酸,异-C17 : 0;主要甲基萘醌,MK-9(H2);细胞壁氨基酸,鸟氨酸、丝氨酸、甘氨酸、谷氨酸、丙氨酸和β-丙氨酸;极性脂质,磷脂酰肌醇、磷脂酰甘油、二磷脂酰甘油、一种未鉴定的脂质、一种未鉴定的磷酸糖脂和三种未鉴定的糖脂;主要细胞壁糖,甘露糖、阿拉伯糖和木糖)表明这两株菌株均属于嗜热芽胞孢菌属。16S rRNA基因序列分析表明,菌株A1-2与温泉嗜热芽胞孢菌模式菌株关系最为密切(序列相似性为97.7 %),菌株A3-2与嗜热芽胞孢菌模式菌株关系最为密切(序列相似性为97.2%),但DNA-DNA杂交显示与先前描述的模式菌株的相关性值<67 %。此外,菌株A1-2和菌株A3-2之间 的16S rRNA基因序列相似性和DNA-DNA相关性分别为96.0和33.4%,表明这两株菌株在遗传上是不同的。这两株菌株被提议分别命名为橙色嗜热芽胞孢菌(Thermogemmatispora aurantia sp. nov)和黏土嗜热芽胞孢菌(Thermogemmatispora argillosa sp. nov)。

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