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基于卷积神经网络的静息态功能磁共振成像数据对幼儿孤独症谱系障碍的诊断。

Diagnosis of Autism Spectrum Disorders in Young Children Based on Resting-State Functional Magnetic Resonance Imaging Data Using Convolutional Neural Networks.

机构信息

Department of Computer Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran.

Department of Electrical and Computer Engineering, Kharazmi University, Tehran, Iran.

出版信息

J Digit Imaging. 2019 Dec;32(6):899-918. doi: 10.1007/s10278-019-00196-1.

Abstract

Statistics show that the risk of autism spectrum disorder (ASD) is increasing in the world. Early diagnosis is most important factor in treatment of ASD. Thus far, the childhood diagnosis of ASD has been done based on clinical interviews and behavioral observations. There is a significant need to reduce the use of traditional diagnostic techniques and to diagnose this disorder in the right time and before the manifestation of behavioral symptoms. The purpose of this study is to present the intelligent model to diagnose ASD in young children based on resting-state functional magnetic resonance imaging (rs-fMRI) data using convolutional neural networks (CNNs). CNNs, which are by far one of the most powerful deep learning algorithms, are mainly trained using datasets with large numbers of samples. However, obtaining comprehensive datasets such as ImageNet and achieving acceptable results in medical imaging domain have become challenges. In order to overcome these two challenges, the two methods of "combining classifiers," both dynamic (mixture of experts) and static (simple ‌Bayes) approaches, and "transfer learning" were used in this analysis. In addition, since diagnosis of ASD will be much more effective at an early age, samples ranging in age from 5 to 10 years from global Autism Brain Imaging Data Exchange I and II (ABIDE I and ABIDE II) datasets were used in this research. The accuracy, sensitivity, and specificity of presented model outperform the results of previous studies conducted on ABIDE I dataset (the best results obtained from Adamax optimization technique: accuracy = 0.7273, sensitivity = 0.712, specificity = 0.7348). Furthermore, acceptable classification results were obtained from ABIDE II dataset (the best results obtained from Adamax optimization technique: accuracy = 0.7, sensitivity = 0.582, specificity = 0.804) and the combination of ABIDE I and ABIDE II datasets (the best results obtained from Adam optimization technique: accuracy = 0.7045, sensitivity = 0.679, specificity = 0.7421). We can conclude that the proposed architecture can be considered as an efficient tool for diagnosis of ASD in young children. From another perspective, this proposed method can be applied to analyzing rs-fMRI data related to brain dysfunctions.

摘要

统计数据表明,自闭症谱系障碍(ASD)的风险在全球范围内呈上升趋势。早期诊断是 ASD 治疗的最重要因素。迄今为止,ASD 的儿童期诊断是基于临床访谈和行为观察来进行的。因此,有必要减少对传统诊断技术的使用,并在出现行为症状之前及时诊断出这种疾病。本研究的目的是提出一种基于静息态功能磁共振成像(rs-fMRI)数据的卷积神经网络(CNN)的儿童 ASD 智能诊断模型。CNN 是目前最强大的深度学习算法之一,主要使用具有大量样本的数据集进行训练。然而,获取全面的数据集,如 ImageNet,并在医学成像领域取得可接受的结果已成为挑战。为了克服这两个挑战,在本分析中使用了“分类器组合”的两种方法,即动态(专家混合)和静态(简单贝叶斯)方法,以及“迁移学习”。此外,由于在早期诊断 ASD 会更有效,因此本研究使用了来自全球自闭症脑成像数据交换 I 和 II (ABIDE I 和 ABIDE II)数据集的年龄在 5 到 10 岁的样本。与之前在 ABIDE I 数据集上进行的研究相比,所提出模型的准确性、敏感性和特异性都表现出色(Adamax 优化技术获得的最佳结果:准确性=0.7273,敏感性=0.712,特异性=0.7348)。此外,从 ABIDE II 数据集(Adamax 优化技术获得的最佳结果:准确性=0.7,敏感性=0.582,特异性=0.804)和 ABIDE I 和 ABIDE II 数据集的组合(Adam 优化技术获得的最佳结果:准确性=0.7045,敏感性=0.679,特异性=0.7421)中获得了可接受的分类结果。我们可以得出结论,所提出的架构可以被视为诊断幼儿 ASD 的有效工具。从另一个角度来看,该方法可以应用于分析与脑功能障碍相关的 rs-fMRI 数据。

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本文引用的文献

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Adaptive Mixtures of Local Experts.局部专家的自适应混合模型
Neural Comput. 1991 Spring;3(1):79-87. doi: 10.1162/neco.1991.3.1.79.
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Front Neurosci. 2014 Aug 20;8:229. doi: 10.3389/fnins.2014.00229. eCollection 2014.

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