Department of Computer Science and Information Engineering, National Chung Cheng University, Chia-Yi, Taiwan.
Department of Energy, Joint Genome Institute, Walnut Creek, California.
Zoonoses Public Health. 2019 Sep;66(6):679-685. doi: 10.1111/zph.12580. Epub 2019 Apr 12.
Shewanella xiamenensis is an emerging pathogen causing intra-abdominal infection and intestinal colonization. Epidemiologic clues suggest its role as a potential food-borne zoonotic agent. To date, four genome sequences of S. xiamenensis have been made publicly available. All of them were isolated from water samples. In this study, we characterized the genome of a S. xiamenensis strain isolated from a giant grouper in Taiwan. The genome of S. xiamenensis ZYW1 is 4,827,717 bp in length and encodes 4,239 open reading frames. Its genomic sequence shares high homology with other S. xiamenensis strains. bla was identified. This is the first detection of S. xiamenensis in Taiwan. These genomic data and analyses contribute to our understanding of S. xiamenensis and may help to elucidate disease-causing mechanisms in future studies.
厦门希瓦菌是一种新兴的病原体，可引起腹腔内感染和肠道定植。流行病学线索表明其可能是一种食源性病原体。迄今为止，已有四个厦门希瓦菌的基因组序列公开可用。它们均从水样中分离得到。在本研究中，我们对从台湾的一条巨型石斑鱼中分离出的厦门希瓦菌菌株的基因组进行了表征。厦门希瓦菌 ZYW1 的基因组长度为 4827717bp，编码 4239 个开放阅读框。其基因组序列与其他厦门希瓦菌菌株具有高度同源性。鉴定出 bla。这是在台湾首次检测到厦门希瓦菌。这些基因组数据和分析有助于我们了解厦门希瓦菌，并可能有助于在未来的研究中阐明致病机制。
