Seppälä Susanna, Yoo Justin I, Yur Daniel, O'Malley Michelle A
Department of Chemical Engineering, University of California, Santa Barbara, CA, 93106, USA.
Metab Eng Commun. 2019 Apr 11;9:e00091. doi: 10.1016/j.mec.2019.e00091. eCollection 2019 Dec.
Membrane-embedded transporters are crucial for the stability and performance of microbial production strains. Apart from engineering known transporters derived from model systems, it is equally important to identify transporters from nonconventional organisms that confer advantageous traits for biotechnological applications. Here, we transferred genes encoding fluoride exporter (FEX) proteins from three strains of early-branching anaerobic fungi () to . The heterologous transporters are localized to the plasma membrane and complement a fluoride-sensitive yeast strain that is lacking endogenous fluoride transporters up to 10.24 mM fluoride. Furthermore, we show that fusing an amino-terminal leader sequence to FEX proteins in yeast elevates protein yields, yet inadvertently causes a loss of transporter function. Adaptive laboratory evolution of FEX proteins restores fluoride tolerance of these strains, in one case exceeding the solute tolerance observed in wild type ; however, the underlying molecular mechanisms and cause for the increased tolerance in the evolved strains remain elusive. Our results suggest that microbial cultures can achieve solvent tolerance through different adaptive trajectories, and the study is a promising step towards the identification, production, and biotechnological application of membrane proteins from nonconventional fungi.
膜嵌入转运蛋白对于微生物生产菌株的稳定性和性能至关重要。除了对源自模式系统的已知转运蛋白进行工程改造外,从非传统生物中鉴定出具有生物技术应用优势性状的转运蛋白同样重要。在此,我们将编码氟化物输出蛋白(FEX)的基因从三株早期分支厌氧真菌转移至酿酒酵母。这些异源转运蛋白定位于质膜,并能补充缺乏内源性氟化物转运蛋白的对氟化物敏感的酵母菌株,使其在高达10.24 mM氟化物的环境中生长。此外,我们表明在酵母中给FEX蛋白融合一个氨基末端前导序列可提高蛋白产量,但无意中会导致转运蛋白功能丧失。对FEX蛋白进行适应性实验室进化可恢复这些菌株对氟化物的耐受性,在一个案例中超过了野生型酿酒酵母中观察到的溶质耐受性;然而,进化菌株中耐受性增加的潜在分子机制和原因仍不清楚。我们的结果表明,微生物培养物可通过不同的适应性轨迹实现溶剂耐受性,并且该研究朝着鉴定、生产和生物技术应用非传统真菌的膜蛋白迈出了有前景的一步。