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大肠杆菌黄素依赖型羟化酶(HpaB)的催化多样性的结构见解。

Structural Insights into Catalytic Versatility of the Flavin-dependent Hydroxylase (HpaB) from Escherichia coli.

机构信息

Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology, Beijing, 100029, China.

State Key Laboratory of Chemical Resource Engineering, Beijing University of Chemical Technology, Beijing, 100029, China.

出版信息

Sci Rep. 2019 May 8;9(1):7087. doi: 10.1038/s41598-019-43577-w.

Abstract

4-Hydroxyphenylacetate 3-hydroxylase (EcHpaB) from Escherichia coli is capable of efficient ortho-hydroxylation of a wide range of phenolic compounds and demonstrates great potential for broad chemoenzymatic applications. To understand the structural and mechanistic basis of its catalytic versatility, we elucidated the crystal structure of EcHpaB by X-ray crystallography, which revealed a unique loop structure covering the active site. We further performed mutagenesis studies of this loop to probe its role in substrate specificity and catalytic activity. Our results not only showed the loop has great plasticity and strong tolerance towards extensive mutagenesis, but also suggested a flexible loop that enables the entrance and stable binding of substrates into the active site is the key factor to the enzyme catalytic versatility. These findings lay the groundwork for editing the loop sequence and structure for generation of EcHpaB mutants with improved performance for broader laboratory and industrial use.

摘要

4- 羟基苯乙酸 3-羟化酶(EcHpaB)来源于大肠杆菌,能够高效地对广泛的酚类化合物进行邻位羟化,在广泛的化学酶法应用中具有巨大的潜力。为了了解其催化多样性的结构和机制基础,我们通过 X 射线晶体学解析了 EcHpaB 的晶体结构,揭示了覆盖活性位点的独特环结构。我们进一步对该环进行了突变研究,以探究其在底物特异性和催化活性中的作用。我们的研究结果不仅表明该环具有很强的可塑性和对广泛的诱变的强耐受性,还表明一个灵活的环能够使底物进入并稳定结合到活性位点,这是该酶催化多样性的关键因素。这些发现为编辑环序列和结构奠定了基础,可用于产生具有改进性能的 EcHpaB 突变体,以扩大实验室和工业用途。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/93f1/6506529/b0e1262529fe/41598_2019_43577_Fig1_HTML.jpg

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