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通过脱敏工程和DszC过表达相结合提高大肠杆菌中油类硫化合物的脱硫效率

Improved Efficiency of the Desulfurization of Oil Sulfur Compounds in Escherichia coli Using a Combination of Desensitization Engineering and DszC Overexpression.

作者信息

Li Lu, Liao Yibo, Luo Yifan, Zhang Guangming, Liao Xihao, Zhang Wei, Zheng Suiping, Han Shuangyan, Lin Ying, Liang Shuli

机构信息

Guangdong Key Laboratory of Fermentation and Enzyme Engineering, Guangdong Research Center of Industrial Enzyme and Green Manufacturing Technology, School of Biology and Biological Engineering , South China University of Technology , Guangzhou 510006 , China.

出版信息

ACS Synth Biol. 2019 Jun 21;8(6):1441-1451. doi: 10.1021/acssynbio.9b00126. Epub 2019 Jun 7.

Abstract

The 4S pathway of biodesulfurization, which can specifically desulfurize aromatic S-heterocyclic compounds without destroying their combustion value, is a low-cost and environmentally friendly technology that is complementary to hydrodesulfurization. The four Dsz enzymes convert the model compound dibenzothiophene (DBT) into the sulfur-free compound 2-hydroxybiphenyl (HBP). Of these four enzymes, DszC, the first enzyme in the 4S pathway, is the most severely affected by the feedback inhibition caused by HBP. This study is the first attempt to directly modify DszC to decrease its inhibition by HBP, with the results showing that the modified protein is insensitive to HBP. On the basis of the principle that the final HBP product could show a blue color with Gibbs reagent, a high-throughput screening method for its rapid detection was established. The screening method and the combinatorial mutagenesis generated the mutant AKWC (A101K/W327C) of DszC. After the IC was calculated, the feedback inhibition of the AKWC mutant was observed to have been substantially reduced. Interestingly, the substrate inhibition of DszC had also been reduced as a result of directed evolution. Finally, the recombinant BL21(DE3)/BADC*+C* (C* represents AKWC) strain exhibited a specific conversion rate of 214.84 μmol/g/h, which was 13.8-fold greater than that of the wild-type strain. Desensitization engineering and the overexpression of the desensitized DszC protein resulted in the elimination of the feedback inhibition bottleneck in the 4S pathway, which is practical and effective progress toward the production of sulfur-free fuel oil. The results of this study demonstrate the utility of desensitization of feedback inhibition regulation in metabolic pathways by protein engineering.

摘要

生物脱硫的4S途径能够特异性地脱除芳香族含硫杂环化合物中的硫,而不破坏其燃烧值,是一种低成本且环保的技术,可作为加氢脱硫的补充。四种Dsz酶将模型化合物二苯并噻吩(DBT)转化为无硫化合物2-羟基联苯(HBP)。在这四种酶中,4S途径中的第一种酶DszC受HBP引起的反馈抑制影响最为严重。本研究首次尝试直接改造DszC以降低其对HBP的抑制作用,结果表明改造后的蛋白对HBP不敏感。基于最终的HBP产物与吉布斯试剂反应会呈现蓝色这一原理,建立了一种用于快速检测的高通量筛选方法。该筛选方法和组合诱变产生了DszC的突变体AKWC(A101K/W327C)。计算出IC后,观察到AKWC突变体的反馈抑制作用已大幅降低。有趣的是,定向进化也降低了DszC的底物抑制作用。最后,重组菌株BL21(DE3)/BADC*+C*(C*代表AKWC)的比转化率为214.84 μmol/g/h,比野生型菌株高13.8倍。脱敏工程和脱敏DszC蛋白的过表达消除了4S途径中的反馈抑制瓶颈,这是朝着生产无硫燃油迈出的切实有效的一步。本研究结果证明了通过蛋白质工程对代谢途径中的反馈抑制调节进行脱敏的实用性。

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