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布斯科布拉托水库濒危的达尔马提亚须鱥(Aulopyge huegelii)的分子遗传多样性

Molecular-genetic diversity of the endangered Dalmatian barbelgudgeon, Aulopyge huegelii from the Buško Blato reservoir.

作者信息

Kalamujić Stroil Belma, Mušović Aldijana, Škrijelj Rifat, Dorić Semir, Đug Samir, Pojskić Naris

机构信息

University of Sarajevo-Institute for Genetic Engineering and Biotechnology, Zmaja od Bosne 8 Kampus, 71000, Sarajevo, Bosnia and Herzegovina.

Faculty of Science, University of Sarajevo, Zmaja od Bosne 33-35, 71000, Sarajevo, Bosnia and Herzegovina.

出版信息

Genetica. 2019 Aug;147(3-4):269-280. doi: 10.1007/s10709-019-00069-z. Epub 2019 Jun 1.

Abstract

A number of studies investigating different aspects of IUCN endangered species, Aulopyge huegelii Heckel, 1843 (Dalmatian barbelgudgeon) biology have been conducted, but data on molecular genetics are lacking. The goal of this survey was to assess the genetic structure of the A. huegelii population from the Buško Blato reservoir, based on four mitochondrial DNA regions and five microsatellite loci. Excluding cytochrome b, more than one haplotype has been detected in all sequenced mtDNA regions, most of which had not been previously described. A total of seven composite haplotypes were detected. Nucleotide diversity was relatively low for all coding genes but slightly higher for the control region. Microsatellite analysis revealed a relatively high value of major allele frequency, lower values of observed and expected heterozygosity, as well as a moderately reduced number of alleles and genotypes in three of the five observed loci. Although with a clear trend of decline, the level of genetic diversity is still sufficient to ensure the subsistence of the population if the stressors are removed. Otherwise, the loss of heterozygosity will continue, possibly to the point of a complete eradication of the Dalmatian barbelgudgeon from the Buško Blato reservoir.

摘要

已经开展了多项研究,对世界自然保护联盟(IUCN)濒危物种——1843年命名的胡氏纹唇鱼(达尔马提亚须鳅)生物学的不同方面进行了调查,但缺乏分子遗传学数据。本次调查的目的是基于四个线粒体DNA区域和五个微卫星位点,评估布斯科布拉托水库胡氏纹唇鱼种群的遗传结构。除细胞色素b外,在所有测序的线粒体DNA区域均检测到不止一种单倍型,其中大多数以前未曾描述过。总共检测到七种复合单倍型。所有编码基因的核苷酸多样性相对较低,但控制区域的核苷酸多样性略高。微卫星分析显示,主要等位基因频率值相对较高,观察到的和预期的杂合度值较低,并且在五个观察位点中的三个位点上等位基因和基因型数量适度减少。尽管有明显的下降趋势,但如果去除压力源,遗传多样性水平仍足以确保种群的生存。否则,杂合性的丧失将继续,达尔马提亚须鳅可能会从布斯科布拉托水库完全灭绝。

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