Department of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Department of General Surgery, Xiamen Branch, Zhongshan Hospital, Fudan University, Xiamen, 361015, China.
Cell Death Dis. 2019 Jun 3;10(6):430. doi: 10.1038/s41419-019-1658-2.
Unraveling the noncoding RNA expression networks governing cancer initiation and development is essential while remains largely uncompleted in retroperitoneal liposarcoma (RLS). Through RNA-seq technologies and computational biology, deregulated long noncoding RNAs (lncRNAs) are being identified and reveal that lncRNAs are implicated in serial steps of RLS development. High-throughput sequencing with computational methods for assembling the transcriptome of five paired RLS patient's tissues. We found that long intergenic noncoding RNA 423 (linc00423) was downregulated in RLS tissues. Gain-of-function assays revealed that overexpressed linc00423 obviously inhibited RLS cell growth in vitro and in vivo. Additionally, RNA sequence, RNA-pulldown and RIP assays evidenced that linc00423 involved in MAPK signaling pathway via destabilizing of nuclear factor of activated T-cells 3 (NFATC3). Summing up, our findings demonstrated that linc00423 acted as the tumor suppressor in RLS cells through regulating the protein level of NFATC3 at a post-transcriptional level and negatively regulated the MAPK signaling pathway at a transcriptional level. Linc00423 might serve as a candidate prognostic biomarker and a target for novel therapies of RLS patients.
解析癌症发生和发展的非编码 RNA 表达网络是至关重要的,而在腹膜后脂肪肉瘤(RLS)中这方面的研究还远未完成。通过 RNA-seq 技术和计算生物学,我们发现了失调的长非编码 RNA(lncRNA),并揭示了 lncRNA 参与了 RLS 发展的多个连续步骤。通过高通量测序和计算方法对五对 RLS 患者组织的转录组进行了组装。我们发现长基因间非编码 RNA 423(linc00423)在 RLS 组织中下调。功能获得性实验表明,过表达 linc00423 可明显抑制 RLS 细胞在体外和体内的生长。此外,RNA 序列、RNA 下拉和 RIP 实验表明,linc00423 通过核因子活化 T 细胞 3(NFATC3)的不稳定性参与 MAPK 信号通路。综上所述,我们的研究结果表明,linc00423 通过在转录后水平调节 NFATC3 的蛋白水平,在 MAPK 信号通路中发挥抑癌作用,并负调控 MAPK 信号通路。linc00423 可能作为 RLS 患者的候选预后标志物和新型治疗靶点。