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通过染色体步移连接人类免疫球蛋白VK和JK基因座的恒定区。

Linking of the human immunoglobulin VK and JKCK regions by chromosomal walking.

作者信息

Klobeck H G, Zimmer F J, Combriato G, Zachau H G

机构信息

Institut für Physiologische Chemie, Physikalische Biochemie und Zellbiologie, Universität München, FRG.

出版信息

Nucleic Acids Res. 1987 Dec 10;15(23):9655-65. doi: 10.1093/nar/15.23.9655.

DOI:10.1093/nar/15.23.9655
PMID:3122178
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC306522/
Abstract

The linking of the human VK and JKCK gene regions (abbreviations in ref. 1) by chromosomal walking is reported. Hybridization experiments with the DNA of a somatic cell hybrid containing the region between JKCK and the telomer show that none of the major VK gene clusters is located downstream of CK. The distance between the VK and JK genes was found to be 23 kb. The JK proximal VK gene is the B3 gene which is the only representative of subgroup IV in the genome. This gene and the neighbouring B2 gene (accompanying paper) are arranged in opposite orientation to JKCK and can therefore rearrange only by an inversion mechanism. This finding is used, together with previous data, to delineate the rearrangement processes in the Burkitt lymphoma derived cell line BL21 as comprising an inversion in the first and a deletion in the second step.

摘要

本文报道了通过染色体步移法将人类VK和JKCK基因区域(参考文献1中的缩写)连接起来的研究。对含有JKCK和端粒之间区域的体细胞杂种DNA进行杂交实验,结果表明,主要的VK基因簇均不在CK下游。发现VK和JK基因之间的距离为23 kb。JK近端的VK基因是B3基因,它是基因组中IV亚组的唯一代表。该基因和相邻的B2基因(随附论文)与JKCK呈相反方向排列,因此只能通过倒位机制进行重排。这一发现与先前的数据一起,用于描述伯基特淋巴瘤衍生细胞系BL21中的重排过程,该过程包括第一步的倒位和第二步的缺失。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eea9/306522/046ad6c8df74/nar00267-0050-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eea9/306522/046ad6c8df74/nar00267-0050-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eea9/306522/046ad6c8df74/nar00267-0050-a.jpg

相似文献

1
Linking of the human immunoglobulin VK and JKCK regions by chromosomal walking.通过染色体步移连接人类免疫球蛋白VK和JK基因座的恒定区。
Nucleic Acids Res. 1987 Dec 10;15(23):9655-65. doi: 10.1093/nar/15.23.9655.
2
Physical map of the human immunoglobulin K locus and its implications for the mechanisms of VK-JK rearrangement.人类免疫球蛋白K基因座的物理图谱及其对VK-JK重排机制的影响。
Nucleic Acids Res. 1987 Dec 10;15(23):9667-76. doi: 10.1093/nar/15.23.9667.
3
V lambda and J lambda-C lambda gene segments of the human immunoglobulin lambda light chain locus are separated by 14 kb and rearrange by a deletion mechanism.人类免疫球蛋白λ轻链基因座的Vλ和Jλ-Cλ基因片段相隔14 kb,并通过缺失机制进行重排。
Eur J Immunol. 1991 Jun;21(6):1513-22. doi: 10.1002/eji.1830210627.
4
Reciprocal recombination products of VK-JK joining reactions in human lymphoid cell lines.人类淋巴细胞系中VK-JK连接反应的相互重组产物。
Nucleic Acids Res. 1987 Jan 12;15(1):1-14. doi: 10.1093/nar/15.1.1.
5
Mapping of immunoglobulin variable region genes: relationship to the 'deletion' model of immunoglobulin gene rearrangement.免疫球蛋白可变区基因的图谱绘制:与免疫球蛋白基因重排的“缺失”模型的关系
Nucleic Acids Res. 1981 Nov 11;9(21):5725-35. doi: 10.1093/nar/9.21.5725.
6
The human CK gene segment and the kappa deleting element are closely linked.人类CK基因片段与κ缺失元件紧密相连。
Nucleic Acids Res. 1986 Jun 11;14(11):4591-603. doi: 10.1093/nar/14.11.4591.
7
A large section of the gene locus encoding human immunoglobulin variable regions of the kappa type is duplicated.编码人κ型免疫球蛋白可变区的基因座的一大段发生了重复。
J Mol Biol. 1985 Jun 5;183(3):291-9. doi: 10.1016/0022-2836(85)90001-4.
8
The J kappa proximal region of the human K locus contains three uncommon V kappa genes which are arranged in opposite transcriptional polarities.人类K基因座的Jκ近端区域包含三个罕见的Vκ基因,它们以相反的转录极性排列。
Mol Immunol. 1988 May;25(5):479-84. doi: 10.1016/0161-5890(88)90168-x.
9
Immunoglobulin genes of different subgroups are interdigitated within the VK locus.不同亚组的免疫球蛋白基因在VK基因座内相互交错。
Nucleic Acids Res. 1984 Dec 21;12(24):9229-36. doi: 10.1093/nar/12.24.9229.
10
Induced rearrangement of kappa genes in the BLIN-1 human pre-B cell line correlates with germline J-C kappa and V kappa transcription.BLIN-1人前B细胞系中κ基因的诱导重排与种系J-Cκ和Vκ转录相关。
J Exp Med. 1991 Mar 1;173(3):639-45. doi: 10.1084/jem.173.3.639.

引用本文的文献

1
The immunoglobulin kappa locus: polymorphism and haplotypes of Caucasoid and non-Caucasoid individuals.免疫球蛋白κ基因座:白种人和非白种人的多态性及单倍型
Hum Genet. 1993 Apr;91(3):261-7. doi: 10.1007/BF00218268.
2
Human lupus anti-DNA autoantibodies undergo essentially primary V kappa gene rearrangements.人类狼疮抗DNA自身抗体主要经历原发性Vκ基因重排。
EMBO J. 1994 Jul 1;13(13):2951-62. doi: 10.1002/j.1460-2075.1994.tb06593.x.
3
The reciprocal recombination product of a VK-JK joining reaction remains on chromosome 2p12.VK-JK连接反应的相互重组产物保留在2号染色体的p12区域。

本文引用的文献

1
Correlation between immunoglobulin light chain expression and variant translocation in Burkitt's lymphoma.伯基特淋巴瘤中免疫球蛋白轻链表达与变异易位之间的相关性
Nature. 1982 Jul 29;298(5873):474-6. doi: 10.1038/298474a0.
2
DNA between variable and joining gene segments of immunoglobulin kappa light chain is frequently retained in cells that rearrange the kappa locus.免疫球蛋白κ轻链可变基因片段与连接基因片段之间的DNA经常保留在重排κ基因座的细胞中。
Proc Natl Acad Sci U S A. 1982 Jan;79(2):262-6. doi: 10.1073/pnas.79.2.262.
3
Recombined flanks of the variable and joining segments of immunoglobulin genes.
Nucleic Acids Res. 1988 Jul 11;16(13):6243. doi: 10.1093/nar/16.13.6243.
4
Rearrangement by inversion of a T-cell receptor delta variable region gene located 3' of the delta constant region gene.
Proc Natl Acad Sci U S A. 1989 Jan;86(1):267-71. doi: 10.1073/pnas.86.1.267.
5
Three breakpoints of variant t(2;8) translocations in Burkitt's lymphoma cells fall within a region 140 kilobases distal from c-myc.伯基特淋巴瘤细胞中变异型t(2;8)易位的三个断点位于距c-myc基因140千碱基远的一个区域内。
Mol Cell Biol. 1989 May;9(5):2105-13. doi: 10.1128/mcb.9.5.2105-2113.1989.
6
Direct evidence for intrastrand DNA inversion of kappa immunoglobulin gene segments in two murine plasmacytomas.在两个小鼠浆细胞瘤中κ免疫球蛋白基因片段链内DNA倒位的直接证据。
Nucleic Acids Res. 1989 Dec 11;17(23):9797-809. doi: 10.1093/nar/17.23.9797.
7
The immunoglobulin kappa locus contains a second, stronger B-cell-specific enhancer which is located downstream of the constant region.免疫球蛋白κ基因座包含第二个更强的B细胞特异性增强子,其位于恒定区下游。
EMBO J. 1989 Jul;8(7):1959-64. doi: 10.1002/j.1460-2075.1989.tb03601.x.
8
The mouse immunoglobulin kappa light-chain genes are located in early- and late-replicating regions of chromosome 6.小鼠免疫球蛋白κ轻链基因位于6号染色体的早期和晚期复制区域。
Mol Cell Biol. 1990 Aug;10(8):4314-23. doi: 10.1128/mcb.10.8.4314-4323.1990.
9
Transposition of human immunoglobulin V kappa genes within the same chromosome and the mechanism of their amplification.人类免疫球蛋白Vκ基因在同一染色体内的转位及其扩增机制。
EMBO J. 1990 May;9(5):1535-42. doi: 10.1002/j.1460-2075.1990.tb08272.x.
10
Induced rearrangement of kappa genes in the BLIN-1 human pre-B cell line correlates with germline J-C kappa and V kappa transcription.BLIN-1人前B细胞系中κ基因的诱导重排与种系J-Cκ和Vκ转录相关。
J Exp Med. 1991 Mar 1;173(3):639-45. doi: 10.1084/jem.173.3.639.
免疫球蛋白基因可变区和连接区的重组侧翼序列。
Proc Natl Acad Sci U S A. 1982 Mar;79(5):1383-7. doi: 10.1073/pnas.79.5.1383.
4
Mapping of immunoglobulin variable region genes: relationship to the 'deletion' model of immunoglobulin gene rearrangement.免疫球蛋白可变区基因的图谱绘制:与免疫球蛋白基因重排的“缺失”模型的关系
Nucleic Acids Res. 1981 Nov 11;9(21):5725-35. doi: 10.1093/nar/9.21.5725.
5
Immunoglobulin V/J recombination is accompanied by deletion of joining site and variable region segments.免疫球蛋白V/J重组伴随着连接位点和可变区片段的缺失。
Proc Natl Acad Sci U S A. 1980 Oct;77(10):6022-6. doi: 10.1073/pnas.77.10.6022.
6
Translocation of an immunoglobulin kappa locus to a region 3' of an unrearranged c-myc oncogene enhances c-myc transcription.免疫球蛋白κ基因座易位至未重排的c-myc癌基因3'端区域可增强c-myc转录。
Proc Natl Acad Sci U S A. 1983 Dec;80(24):7581-5. doi: 10.1073/pnas.80.24.7581.
7
A novel type of aberrant recombination in immunoglobulin genes and its implications for V-J joining mechanism.免疫球蛋白基因中一种新型的异常重组及其对V-J连接机制的影响。
Nature. 1983;302(5905):260-3. doi: 10.1038/302260a0.
8
Immunoglobulin gene 'remnant' DNA--implications for antibody gene recombination.免疫球蛋白基因“残留”DNA——对抗体基因重组的影响
Nucleic Acids Res. 1984 May 25;12(10):4229-46. doi: 10.1093/nar/12.10.4229.
9
Contribution of human V kappa II germ-line genes to light-chain diversity.人类VκII种系基因对轻链多样性的贡献。
Nature. 1984;309(5963):73-6. doi: 10.1038/309073a0.
10
Joining of V kappa to J kappa gene segments in a retroviral vector introduced into lymphoid cells.在导入淋巴细胞的逆转录病毒载体中Vκ与Jκ基因片段的连接。
Nature. 1984;308(5958):425-8. doi: 10.1038/308425a0.