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甘蓝型油菜内卷叶基因(BnUC1)的精细定位。

Fine mapping of an up-curling leaf locus (BnUC1) in Brassica napus.

机构信息

National Key Laboratory of Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, 210095, China.

出版信息

BMC Plant Biol. 2019 Jul 19;19(1):324. doi: 10.1186/s12870-019-1938-0.

Abstract

BACKGROUND

Leaf shape development research is important because leaf shapes such as moderate curling can help to improve light energy utilization efficiency. Leaf growth and development includes initiation of the leaf primordia and polar differentiation of the proximal-distal, adaxial-abaxial, and centrolateral axes. Changes in leaf adaxial-abaxial polarity formation, auxin synthesis and signaling pathways, and development of sclerenchyma and cuticle can cause abnormal leaf shapes such as up-curling leaf. Although many genes related to leaf shape development have been reported, the detailed mechanism of leaf development is still unclear. Here, we report an up-curling leaf mutant plant from our Brassica napus germplasm. We studied its inheritance, mapped the up-curling leaf locus BnUC1, built near-isogenic lines for the Bnuc1 mutant, and evaluated the effect of the dominant leaf curl locus on leaf photosynthetic efficiency and agronomic traits.

RESULTS

The up-curling trait was controlled by one dominant locus in a progeny population derived from NJAU5734 and Zhongshuang 11 (ZS11). This BnUC1 locus was mapped in an interval of 2732.549 kb on the A05 chromosome of B. napus using Illumina Brassica 60 K Bead Chip Array. To fine map BnUC1, we designed 201 simple sequence repeat (SSR) primers covering the mapping interval. Among them, 16 polymorphic primers that narrowed the mapping interval to 54.8 kb were detected using a BCF family population with 654 individuals. We found six annotated genes in the mapping interval using the B. napus reference genome, including BnaA05g18250D and BnaA05g18290D, which bioinformatics and gene expression analyses predicted may be responsible for leaf up-curling. The up-curling leaf trait had negative effects on the agronomic traits of 30 randomly selected individuals from the BCF population. The near-isogenic line of the up-curling leaf (ZS11-UC1) was constructed to evaluate the effect of BnUC1 on photosynthetic efficiency. The results indicated that the up-curling leaf trait locus was beneficial to improve the photosynthetic efficiency.

CONCLUSIONS

An up-curling leaf mutant Bnuc1 was controlled by one dominant locus BnUC1. This locus had positive effects on photosynthetic efficiency, negative effects on some agronomic traits, and may help to increase planting density in B. napus.

摘要

背景

叶片形状的发育研究很重要,因为适度卷曲的叶片形状有助于提高光能利用效率。叶片的生长和发育包括叶片原基的起始和近-远轴、腹-背轴以及中-侧轴的极性分化。叶片腹-背极性形成、生长素合成和信号通路的变化,以及厚壁组织和角质层的发育,会导致叶片向上卷曲等异常形状。虽然已经报道了许多与叶片形状发育相关的基因,但叶片发育的详细机制仍不清楚。在这里,我们从甘蓝型油菜种质资源中报告了一个叶片向上卷曲的突变体植株。我们研究了它的遗传,定位了叶片向上卷曲的 BnUC1 基因座,构建了 Bnuc1 突变体的近等基因系,并评估了显性卷曲叶基因座对叶片光合效率和农艺性状的影响。

结果

从 NJAU5734 和中双 11(ZS11)的后代群体中,发现了一个由一个显性基因座控制的叶片向上卷曲性状。该 BnUC1 基因座定位于油菜 60K 芯片上 A05 染色体的 2732.549kb 区间内。为了精细定位 BnUC1,我们设计了 201 个覆盖该作图区间的简单重复序列(SSR)引物。其中,使用包含 654 个个体的 BCF 家系群体,检测到 16 个多态性引物将作图区间缩小到 54.8kb。利用油菜参考基因组,在作图区间内发现了 6 个注释基因,包括 BnaA05g18250D 和 BnaA05g18290D,生物信息学和基因表达分析预测这两个基因可能是导致叶片向上卷曲的原因。在 BCF 群体中,从 30 个随机个体中构建了近等基因系,以评估 BnUC1 对光合效率的影响。结果表明,叶片向上卷曲性状基因座有利于提高光合效率。

结论

一个叶片向上卷曲的突变体 Bnuc1 由一个显性基因座 BnUC1 控制。该基因座对光合效率有积极影响,对一些农艺性状有负面影响,可能有助于提高油菜的种植密度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/93b1/6642557/07624adcde02/12870_2019_1938_Fig1_HTML.jpg

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