Hesami Mohsen, Naderi Roohangiz, Tohidfar Masoud, Yoosefzadeh-Najafabadi Mohsen
Department of Horticultural Science, Faculty of Agriculture, University of Tehran, Karaj, Iran.
Department of Plant Biotechnology, Faculty of Science and Biotechnology, Shahid Beheshti University, Tehran, Iran.
Front Plant Sci. 2019 Jul 5;10:869. doi: 10.3389/fpls.2019.00869. eCollection 2019.
A hybrid artificial intelligence model and optimization algorithm could be a powerful approach for modeling and optimizing plant tissue culture procedures. The aim of this study was introducing an Adaptive Neuro-Fuzzy Inference System- Non-dominated Sorting Genetic Algorithm-II (ANFIS-NSGAII) as a powerful computational methodology for somatic embryogenesis of chrysanthemum, as a case study. ANFIS was used for modeling three outputs including callogenesis frequency (CF), embryogenesis frequency (EF), and the number of somatic embryo (NSE) based on different variables including 2,4-dichlorophenoxyacetic acid (2,4-D), 6-benzylaminopurine (BAP), sucrose, glucose, fructose, and light quality. Subsequently, models were linked to NSGAII for optimizing the process, and the importance of each input was evaluated by sensitivity analysis. Results showed that all of the R of training and testing sets were over 92%, indicating the efficiency and accuracy of ANFIS on the modeling of the embryogenesis. Also, according to ANFIS-NSGAII, optimal EF (99.1%), and NSE (13.1) can be obtained from a medium containing 1.53 mg/L 2,4-D, 1.67 mg/L BAP, 13.74 g/L sucrose, 57.20 g/L glucose, and 0.39 g/L fructose under red light. The results of the sensitivity analysis showed that embryogenesis was more sensitive to 2,4-D, and less sensitive to fructose. Generally, the hybrid ANFIS-NSGAII can be recognized as a powerful computational tool for modeling and optimizing in plant tissue culture.
一种混合人工智能模型和优化算法可能是对植物组织培养程序进行建模和优化的有力方法。本研究的目的是引入一种自适应神经模糊推理系统-非支配排序遗传算法-II(ANFIS-NSGAII),作为菊花体细胞胚胎发生的一种强大计算方法的案例研究。ANFIS用于基于包括2,4-二氯苯氧乙酸(2,4-D)、6-苄基腺嘌呤(BAP)、蔗糖、葡萄糖、果糖和光质等不同变量,对包括愈伤组织发生频率(CF)、胚胎发生频率(EF)和体细胞胚数量(NSE)这三个输出进行建模。随后,将模型与NSGAII链接以优化该过程,并通过敏感性分析评估每个输入的重要性。结果表明,训练集和测试集的所有R值均超过92%,表明ANFIS在胚胎发生建模方面的有效性和准确性。此外,根据ANFIS-NSGAII,在红光下,从含有1.53mg/L 2,4-D、1.67mg/L BAP、13.74g/L蔗糖、57.20g/L葡萄糖和0.39g/L果糖的培养基中可获得最佳的EF(99.1%)和NSE(13.1)。敏感性分析结果表明,胚胎发生对2,4-D更敏感,对果糖较不敏感。总体而言,混合的ANFIS-NSGAII可被视为植物组织培养中建模和优化的强大计算工具。