State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China.
Institut für Analytische Chemie, Universität Leipzig, Linnéstraße 3, 04103 Leipzig, Germany.
Int J Mol Sci. 2019 Jul 26;20(15):3656. doi: 10.3390/ijms20153656.
Unlike canonical phytochromes, the GAF domain of cyanobacteriochromes (CBCRs) can bind bilins autonomously and is sufficient for functional photocycles. Despite the astonishing spectral diversity of CBCRs, the GAF1 domain of the three-GAF-domain photoreceptor all2699 from the cyanobacterium 7120 is the only CBCR-GAF known that converts from a red-absorbing (Pr) dark state to a far-red-absorbing (Pfr) photoproduct, analogous to the more conservative phytochromes. Here we report a solid-state NMR spectroscopic study of all2699g1 in its Pr state. Conclusive NMR evidence unveils a particular stereochemical heterogeneity at the tetrahedral C3 atom, whereas the crystal structure shows exclusively the -stereochemistry at this chiral center. Additional NMR experiments were performed on a construct comprising the GAF1 and GAF2 domains of all2699, showing a greater precision in the chromophore-protein interactions in the GAF1-2 construct. A 3D Pr structural model of the all2699g1-2 construct predicts a tongue-like region extending from the GAF2 domain (akin to canonical phytochromes) in the direction of the chromophore, shielding it from the solvent. In addition, this stabilizing element allows exclusively the -stereochemistry for the chromophore-protein linkage. Site-directed mutagenesis performed on three conserved motifs in the hairpin-like tip confirms the interaction of the tongue region with the GAF1-bound chromophore.
不同于经典的光敏色素,蓝藻发色团(CBCRs)的 GAF 结构域可以自主结合生色团,并且足以完成功能性光循环。尽管 CBCRs 的光谱多样性令人惊讶,但来自蓝藻 7120 的三 GAF 结构域光受体 all2699 的 GAF1 结构域是唯一已知的 CBCR-GAF,它可以从红光吸收(Pr)暗态转化为远红光吸收(Pfr)光产物,类似于更保守的光敏色素。在这里,我们报告了固态 NMR 光谱研究 all2699g1 的 Pr 态。确凿的 NMR 证据揭示了四面体 C3 原子处特定的立体化学异质性,而晶体结构仅显示该手性中心的 -立体化学。对包含 all2699 的 GAF1 和 GAF2 结构域的构建体进行了额外的 NMR 实验,显示了 GAF1-2 构建体中发色团-蛋白相互作用的更高精度。all2699g1-2 构建体的 Pr 结构模型预测了一个从 GAF2 结构域(类似于经典的光敏色素)延伸到发色团的舌状区域,将其屏蔽在溶剂之外。此外,这种稳定元件仅允许发色团-蛋白键合的 -立体化学。在发夹状尖端的三个保守模体上进行的定点突变证实了舌区域与 GAF1 结合的发色团的相互作用。