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sp. nov.,一种从冰川冰中分离出的嗜冷细菌。

sp. nov., a psychrophilic bacterium isolated from glacier ice.

机构信息

China General Microbiological Culture Collection Center (CGMCC), Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.

Experimental School of Beihang University, Beijing 100083, PR China.

出版信息

Int J Syst Evol Microbiol. 2019 Oct;69(10):3276-3280. doi: 10.1099/ijsem.0.003620.

DOI:10.1099/ijsem.0.003620
PMID:31361217
Abstract

A psychrophilic, Gram-stain-positive, rod-shaped bacterium, designated Hh39, was isolated from Xinjiang No. 1 glacier in PR China. Strain Hh39 was catalase-positive, oxidase-negative and could grow at 0-18 °C, pH 6.0-11.0 and in the presence of 0-2.5 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain Hh39 belonged to the genus . The highest level of 16S rRNA gene sequence similarities were found to the type strains of (99.01 %), (98.90 %), (98.90 %) and (98.75 %). However, the low average nucleotide identity (80.65-81.89 %) and digital DNA-DNA hybridization values (22.1-23.8 %) between strain Hh39 and its four closest relatives indicated that it represents a novel species of the genus . The predominant fatty acids were anteiso-C, anteiso-C, iso-C and anteiso-C. The major menaquinone was MK-10. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, one unidentified lipid and one unidentified glycolipid. On the basis of results of phenotypic, genotypic and phylogenetic analyses, a novel species, sp. nov., is proposed, with Hh39 (=NBRC 107884=CGMCC 1.11212) as the type strain.

摘要

一株嗜冷、革兰氏阳性、杆状细菌,被命名为 Hh39,从中国新疆 1 号冰川中分离得到。菌株 Hh39 过氧化氢酶阳性,氧化酶阴性,可以在 0-18°C、pH 值 6.0-11.0 和 0-2.5%(w/v)NaCl 的条件下生长。基于 16S rRNA 基因序列的系统发育分析表明,菌株 Hh39 属于 属。与该属的 (99.01%)、 (98.90%)、 (98.90%)和 (98.75%)的模式菌株的 16S rRNA 基因序列相似度最高。然而,菌株 Hh39 与它的四个最近亲缘种之间的平均核苷酸同一性(80.65-81.89%)和数字 DNA-DNA 杂交值(22.1-23.8%)较低,表明它代表了 属的一个新种。主要脂肪酸为 anteiso-C、anteiso-C、iso-C 和 anteiso-C。主要的menaquinone 是 MK-10。极性脂为双磷脂酰甘油、磷脂酰甘油、一种未鉴定的脂和一种未鉴定的糖脂。基于表型、基因型和系统发育分析的结果,提出了一个新的物种,即 sp. nov.,以 Hh39(=NBRC 107884=CGMCC 1.11212)作为模式菌株。

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