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Proteomics Is Not an Island: Multi-omics Integration Is the Key to Understanding Biological Systems.

作者信息

Zhang Bing, Kuster Bernhard

机构信息

Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, Texas; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.

Chair of Proteomics and Bioanalytics, Technische Universitat Munchen, Freising, Germany; Bavarian Biomolecular Mass Spectrometry Center, Technische Universitat Munchen, Freising, Germany.

出版信息

Mol Cell Proteomics. 2019 Aug 9;18(8 suppl 1):S1-S4. doi: 10.1074/mcp.E119.001693.

DOI:10.1074/mcp.E119.001693
PMID:31399542
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6692779/
Abstract
摘要

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本文引用的文献

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Mol Cell Proteomics. 2019 Aug 9;18(8 suppl 1):S37-S51. doi: 10.1074/mcp.RA118.001232. Epub 2019 Jul 8.
2
Integrative Proteo-genomic Analysis to Construct CNA-protein Regulatory Map in Breast and Ovarian Tumors.整合蛋白质基因组分析构建乳腺癌和卵巢肿瘤的 CNA-蛋白调控图谱。
Mol Cell Proteomics. 2019 Aug 9;18(8 suppl 1):S66-S81. doi: 10.1074/mcp.RA118.001229. Epub 2019 Jul 7.
3
Reproducibility and Transparency by Design.设计可重复性和透明度。
Mol Cell Proteomics. 2019 Aug 9;18(8 suppl 1):S202-S204. doi: 10.1074/mcp.IP119.001567. Epub 2019 Jul 4.
4
MOGSA: Integrative Single Sample Gene-set Analysis of Multiple Omics Data.MOGSA：整合多个组学数据的单样本基因集分析。
Mol Cell Proteomics. 2019 Aug 9;18(8 suppl 1):S153-S168. doi: 10.1074/mcp.TIR118.001251. Epub 2019 Jun 26.
5
Multi-omics Characterization of Interaction-mediated Control of Human Protein Abundance levels.多组学分析交互作用介导的人类蛋白质丰度水平调控。
Mol Cell Proteomics. 2019 Aug 9;18(8 suppl 1):S114-S125. doi: 10.1074/mcp.RA118.001280. Epub 2019 Jun 25.
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metaQuantome: An Integrated, Quantitative Metaproteomics Approach Reveals Connections Between Taxonomy and Protein Function in Complex Microbiomes.元蛋白组学：一种综合的、定量的宏蛋白质组学方法，揭示了复杂微生物组中分类与蛋白质功能之间的联系。
Mol Cell Proteomics. 2019 Aug 9;18(8 suppl 1):S82-S91. doi: 10.1074/mcp.RA118.001240. Epub 2019 Jun 24.
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An Integrative Analysis of Tumor Proteomic and Phosphoproteomic Profiles to Examine the Relationships Between Kinase Activity and Phosphorylation.肿瘤蛋白质组和磷酸化蛋白质组综合分析，探讨激酶活性与磷酸化之间的关系。
Mol Cell Proteomics. 2019 Aug 9;18(8 suppl 1):S26-S36. doi: 10.1074/mcp.RA119.001540. Epub 2019 Jun 21.
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Insights into Impact of DNA Copy Number Alteration and Methylation on the Proteogenomic Landscape of Human Ovarian Cancer via a Multi-omics Integrative Analysis.通过多组学综合分析深入了解 DNA 拷贝数改变和甲基化对人类卵巢癌蛋白质基因组景观的影响。
Mol Cell Proteomics. 2019 Aug 9;18(8 suppl 1):S52-S65. doi: 10.1074/mcp.RA118.001220. Epub 2019 Jun 21.
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Extracting Pathway-level Signatures from Proteogenomic Data in Breast Cancer Using Independent Component Analysis.基于独立成分分析从乳腺癌的蛋白质基因组数据中提取通路水平特征。
Mol Cell Proteomics. 2019 Aug 9;18(8 suppl 1):S169-S182. doi: 10.1074/mcp.TIR119.001442. Epub 2019 Jun 18.
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TCPA v3.0: An Integrative Platform to Explore the Pan-Cancer Analysis of Functional Proteomic Data.TCPA v3.0：一个综合平台，用于探索功能蛋白质组学数据的泛癌分析。
Mol Cell Proteomics. 2019 Aug 9;18(8 suppl 1):S15-S25. doi: 10.1074/mcp.RA118.001260. Epub 2019 Jun 14.