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通过随机化和预处理实现具有非平滑先验的更快 PET 重建。

Faster PET reconstruction with non-smooth priors by randomization and preconditioning.

机构信息

Institute for Mathematical Innovation, University of Bath, Bath BA2 7JU, United Kingdom.

出版信息

Phys Med Biol. 2019 Nov 21;64(22):225019. doi: 10.1088/1361-6560/ab3d07.

Abstract

Uncompressed clinical data from modern positron emission tomography (PET) scanners are very large, exceeding 350 million data points (projection bins). The last decades have seen tremendous advancements in mathematical imaging tools many of which lead to non-smooth (i.e. non-differentiable) optimization problems which are much harder to solve than smooth optimization problems. Most of these tools have not been translated to clinical PET data, as the state-of-the-art algorithms for non-smooth problems do not scale well to large data. In this work, inspired by big data machine learning applications, we use advanced randomized optimization algorithms to solve the PET reconstruction problem for a very large class of non-smooth priors which includes for example total variation, total generalized variation, directional total variation and various different physical constraints. The proposed algorithm randomly uses subsets of the data and only updates the variables associated with these. While this idea often leads to divergent algorithms, we show that the proposed algorithm does indeed converge for any proper subset selection. Numerically, we show on real PET data (FDG and florbetapir) from a Siemens Biograph mMR that about ten projections and backprojections are sufficient to solve the MAP optimisation problem related to many popular non-smooth priors; thus showing that the proposed algorithm is fast enough to bring these models into routine clinical practice.

摘要

来自现代正电子发射断层扫描(PET)扫描仪的未压缩临床数据非常庞大,超过 3.5 亿个数据点(投影箱)。在过去的几十年中,数学成像工具取得了巨大的进步,其中许多工具导致了非平滑(即不可微)的优化问题,这些问题比平滑优化问题要难解决得多。由于针对非平滑问题的最新算法不适用于大数据,因此这些工具中的大多数尚未应用于临床 PET 数据。在这项工作中,受大数据机器学习应用的启发,我们使用先进的随机优化算法来解决非常大的一类非平滑先验的 PET 重建问题,其中包括例如全变差、全广义变差、方向全变差和各种不同的物理约束。所提出的算法随机使用数据的子集,并且仅更新与这些子集相关的变量。虽然这个想法通常会导致发散的算法,但我们证明所提出的算法确实可以为任何适当的子集选择进行收敛。在数值上,我们使用来自 Siemens Biograph mMR 的真实 PET 数据(FDG 和 florbetapir)进行了展示,只需十个左右的投影和反投影就足以解决与许多流行的非平滑先验相关的 MAP 优化问题;从而表明所提出的算法足够快,可以将这些模型引入常规临床实践。

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