Institute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, 119071 Moscow, Russia.
Lomonosov Moscow State University, 119991 Moscow, Russia.
Int J Mol Sci. 2019 Aug 22;20(17):4107. doi: 10.3390/ijms20174107.
Carnivorous plants have the ability to capture and digest small animals as a source of additional nutrients, which allows them to grow in nutrient-poor habitats. Here we report the complete sequences of the plastid genomes of two carnivorous plants of the order Caryophyllales, and × . The plastome of is repeat-rich and highly rearranged. It lacks NAD(P)H dehydrogenase genes, as well as and genes, and three essential tRNA genes. Intron losses are observed in some protein-coding and tRNA genes along with a pronounced reduction of RNA editing sites. Only six editing sites were identified by RNA-seq in plastid genome and at most conserved editing sites the conserved amino acids are already encoded at the DNA level. In contrast, the × plastome has a typical structure and gene content, except for pseudogenization of the gene. × and could represent different stages of evolution of the plastid genomes of carnivorous plants, resembling events observed in parasitic plants in the course of the switch from autotrophy to a heterotrophic lifestyle.
食虫植物具有捕捉和消化小动物作为额外营养源的能力,这使它们能够在营养贫瘠的栖息地中生长。在这里,我们报告了两个石竹目食虫植物属和 × 的质体基因组的完整序列。的质体基因组富含重复序列且高度重排。它缺乏 NAD(P)H 脱氢酶基因、和 基因以及三个必需的 tRNA 基因。在一些蛋白质编码基因和 tRNA 基因中观察到内含子丢失,同时 RNA 编辑位点明显减少。仅在 质体基因组中通过 RNA-seq 鉴定了六个编辑位点,并且在大多数保守编辑位点中,保守的氨基酸已经在 DNA 水平上编码。相比之下,× 的质体基因组具有典型的结构和基因组成,除了 基因的假基因化。× 和 可能代表了食虫植物质体基因组进化的不同阶段,类似于寄生植物在从自养到异养生活方式转变过程中观察到的事件。