Department of Biochemistry, Tokushima University Graduate School of Medical Sciences, Tokushima, 770-8503, Japan.
Department of Interdisciplinary Researches for Medicine and Photonics, Institute of Post-LED Photonics, Tokushima University, Tokushima, 770-8506, Japan.
Sci Rep. 2019 Sep 5;9(1):12794. doi: 10.1038/s41598-019-49232-8.
JRAB/MICAL-L2 is an effector protein of Rab13, a member of the Rab family of small GTPase. JRAB/MICAL-L2 consists of a calponin homology domain, a LIM domain, and a coiled-coil domain. JRAB/MICAL-L2 engages in intramolecular interaction between the N-terminal LIM domain and the C-terminal coiled-coil domain, and changes its conformation from closed to open under the effect of Rab13. Open-form JRAB/MICAL-L2 induces the formation of peripheral ruffles via an interaction between its calponin homology domain and filamin. Here, we report that the LIM domain, independent of the C-terminus, is also necessary for the function of open-form JRAB/MICAL-L2. In mechanistic terms, two zinc finger domains within the LIM domain bind the first and second molecules of actin at the minus end, potentially inhibiting the depolymerization of actin filaments (F-actin). The first zinc finger domain also contributes to the intramolecular interaction of JRAB/MICAL-L2. Moreover, the residues of the first zinc finger domain that are responsible for the intramolecular interaction are also involved in the association with F-actin. Together, our findings show that the function of open-form JRAB/MICAL-L2 mediated by the LIM domain is fine-tuned by the intramolecular interaction between the first zinc finger domain and the C-terminal domain.
JRAB/MICAL-L2 是 Rab13 的效应蛋白,Rab13 是 Ras 超家族小 GTP 酶的一个成员。JRAB/MICAL-L2 由钙调蛋白同源结构域、LIM 结构域和卷曲螺旋结构域组成。JRAB/MICAL-L2 通过 N 端 LIM 结构域和 C 端卷曲螺旋结构域之间的分子内相互作用,在 Rab13 的作用下其构象从闭合变为开放。开放形式的 JRAB/MICAL-L2 通过其钙调蛋白同源结构域与细丝蛋白之间的相互作用诱导周边皱襞的形成。在这里,我们报告 LIM 结构域独立于 C 端对于开放形式的 JRAB/MICAL-L2 的功能也是必需的。从机制上讲,LIM 结构域内的两个锌指结构域结合在负端的肌动蛋白的第一和第二分子上,可能抑制肌动蛋白丝(F-肌动蛋白)的解聚。第一个锌指结构域也有助于 JRAB/MICAL-L2 的分子内相互作用。此外,负责分子内相互作用的第一个锌指结构域的残基也参与与 F-肌动蛋白的结合。总之,我们的研究结果表明,LIM 结构域介导的开放形式 JRAB/MICAL-L2 的功能通过第一个锌指结构域与 C 端结构域之间的分子内相互作用进行微调。