Kumar Manoj, Singh Parul, Murugesan Selvasankar, Vetizou Marie, McCulloch John, Badger Jonathan H, Trinchieri Giorgio, Al Khodor Souhaila
Division of Translational Medicine, Research Department, Sidra Medicine, Doha, Qatar.
Cancer and Inflammation Program, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Methods Mol Biol. 2020;2055:595-638. doi: 10.1007/978-1-4939-9773-2_27.
Humans are living ecosystems composed of human cells and microbes. The microbiome is the collection of microbes (microbiota) and their genes. Recent breakthroughs in the high-throughput sequencing technologies have made it possible for us to understand the composition of the human microbiome. Launched by the National Institutes of Health in USA, the human microbiome project indicated that our bodies harbor a wide array of microbes, specific to each body site with interpersonal and intrapersonal variabilities. Numerous studies have indicated that several factors influence the development of the microbiome including genetics, diet, use of antibiotics, and lifestyle, among others. The microbiome and its mediators are in a continuous cross talk with the host immune system; hence, any imbalance on one side is reflected on the other. Dysbiosis (microbiota imbalance) was shown in many diseases and pathological conditions such as inflammatory bowel disease, celiac disease, multiple sclerosis, rheumatoid arthritis, asthma, diabetes, and cancer. The microbial composition mirrors inflammation variations in certain disease conditions, within various stages of the same disease; hence, it has the potential to be used as a biomarker.
人类是由人体细胞和微生物组成的活生态系统。微生物组是微生物(微生物群)及其基因的集合。高通量测序技术的最新突破使我们能够了解人类微生物组的组成。由美国国立卫生研究院发起的人类微生物组计划表明,我们的身体含有各种各样的微生物,每个身体部位都有特定的微生物,存在人际和个体内差异。许多研究表明,包括遗传、饮食、抗生素使用和生活方式等在内的几个因素会影响微生物组的发育。微生物组及其介质与宿主免疫系统持续相互作用;因此,一方的任何失衡都会反映在另一方。在许多疾病和病理状况中都出现了生态失调(微生物群失衡),如炎症性肠病、乳糜泻、多发性硬化症、类风湿性关节炎、哮喘、糖尿病和癌症。在某些疾病状况下,在同一种疾病的不同阶段,微生物组成反映炎症变化;因此,它有潜力用作生物标志物。