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中国野生猕猴中鉴定出新型灵长类动物杯状病毒科 3 型。

Novel Primate Bocaparvovirus Species 3 Identified in Wild Macaca Mulatta in China.

机构信息

Chinese Center for Disease Control and Prevention, National Institute for Viral Disease Control and Prevention, Beijing, China.

出版信息

Virol Sin. 2020 Feb;35(1):34-42. doi: 10.1007/s12250-019-00163-8. Epub 2019 Sep 24.

Abstract

Primate bocaparvovirus (BOV) is a possible cause of respiratory disorders and gastroenteritis in humans. However, the diversity and evolution of these viruses remain largely unknown, despite the identification of a growing number of BOVs in non-human primates (NHPs). Here, we report the identification of a novel BOV (provisionally named Macaca mulatta bocaparvovirus [MmBOV]) in the feces of wild Macaca mulatta in China by viral metagenomic analysis. Seven of 400 fecal samples from Macaca mulatta were positive for MmBOV. An almost complete genome sequence of 4,831 nucleotides was obtained, which had genomic organization and protein motifs similar to human bocaviruses (HOBVs), and shared characteristically low G/C content and weak codon usage bias. Sequence analyses of NS1, NP1, and VP1 revealed that MmBOV was most closely related to HBOV4 of Primate bocaparvovirus 2 (approximately 68.4%/70.6%, 73.3%/67.6%, and 70.4%/73.1% nucleotide/amino acid identities, respectively). Additionally, phylogenetic analysis revealed that MmBOV formed an independent peripheral branch, but clustered closely with those of the Primate bocaparvovirus species in the BOV genus (particularly HBOV4). These data strongly suggest that HBOV4 originated from NHP bocaparvoviruses around 200-300 years ago, and that NHPs may act as HBOV reservoirs. Following the International Committee of Taxonomy for Viruses guidelines, we propose MmBOV as a new species (tentatively named Primate bocaparvovirus 3) in the genus Bocaparvovirus, which is the first report of a novel species of primate BOV. Our data facilitate future research on the genetic diversity and evolution of primate bocaparvoviruses and highlight the importance of bocaparvovirus surveys in wild NHPs.

摘要

灵长类动物细小病毒(BOV)可能是人类呼吸道疾病和胃肠炎的病因。然而,尽管在非人类灵长类动物(NHPs)中发现了越来越多的 BOV,但这些病毒的多样性和进化仍在很大程度上未知。在此,我们通过病毒宏基因组分析报告了在中国野生猕猴粪便中发现的一种新型 BOV(暂定名为猕猴细小病毒[MmBOV])。从猕猴的 400 份粪便样本中,有 7 份为 MmBOV 阳性。获得了 4831 个核苷酸的几乎完整基因组序列,其基因组结构和蛋白基序与人类细小病毒(HOBVs)相似,并且具有特征性的低 G/C 含量和较弱的密码子使用偏好。NS1、NP1 和 VP1 的序列分析表明,MmBOV 与灵长类细小病毒 2 的 HOBV4 最为密切相关(约 68.4%/70.6%、73.3%/67.6%和 70.4%/73.1%核苷酸/氨基酸同一性)。此外,系统发育分析表明,MmBOV 形成了一个独立的外围分支,但与 BOV 属的灵长类细小病毒种聚类密切(尤其是 HOBV4)。这些数据强烈表明,HOBV4 起源于 200-300 年前的 NHP bocaparvoviruses,并且 NHP 可能是 HOBV 的储存宿主。根据病毒分类国际委员会的指导原则,我们提议将 MmBOV 作为 Bocaparvovirus 属中的一个新种(暂定名灵长类细小病毒 3),这是首例新型灵长类 BOV 的报道。我们的数据有助于进一步研究灵长类细小病毒的遗传多样性和进化,并强调了对野生 NHP 中 bocaparvovirus 进行调查的重要性。

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