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高保真光学衍射层析成像技术用于多重散射样本的研究

High-fidelity optical diffraction tomography of multiple scattering samples.

作者信息

Lim Joowon, Ayoub Ahmed B, Antoine Elizabeth E, Psaltis Demetri

机构信息

Ecole Polytechnique Fédérale de Lausanne, Optics Laboratory, CH-1015 Lausanne, Switzerland.

出版信息

Light Sci Appl. 2019 Sep 11;8:82. doi: 10.1038/s41377-019-0195-1. eCollection 2019.

Abstract

We propose an iterative reconstruction scheme for optical diffraction tomography that exploits the split-step non-paraxial (SSNP) method as the forward model in a learning tomography scheme. Compared with the beam propagation method (BPM) previously used in learning tomography (LT-BPM), the improved accuracy of SSNP maximizes the information retrieved from measurements, relying less on prior assumptions about the sample. A rigorous evaluation of learning tomography based on SSNP (LT-SSNP) using both synthetic and experimental measurements confirms its superior performance compared with that of the LT-BPM. Benefiting from the accuracy of SSNP, LT-SSNP can clearly resolve structures that are highly distorted in the LT-BPM. A serious limitation for quantifying the reconstruction accuracy for biological samples is that the ground truth is unknown. To overcome this limitation, we describe a novel method that allows us to compare the performances of different reconstruction schemes by using the discrete dipole approximation to generate synthetic measurements. Finally, we explore the capacity of learning approaches to enable data compression by reducing the number of scanning angles, which is of particular interest in minimizing the measurement time.

摘要

我们提出了一种用于光学衍射层析成像的迭代重建方案,该方案在学习层析成像方案中采用分步非傍轴(SSNP)方法作为正向模型。与先前在学习层析成像(LT-BPM)中使用的光束传播方法(BPM)相比,SSNP提高的精度使从测量中检索到的信息最大化,减少了对样品先验假设的依赖。使用合成测量和实验测量对基于SSNP的学习层析成像(LT-SSNP)进行的严格评估证实,与LT-BPM相比,其具有卓越的性能。受益于SSNP的精度,LT-SSNP能够清晰地分辨出在LT-BPM中严重扭曲的结构。量化生物样品重建精度的一个严重限制是真实情况未知。为克服这一限制,我们描述了一种新颖的方法,该方法允许我们通过使用离散偶极近似生成合成测量来比较不同重建方案的性能。最后,我们探索学习方法通过减少扫描角度数量来实现数据压缩的能力,这对于最小化测量时间尤为重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83d7/6804780/bf9436b77f58/41377_2019_195_Fig1_HTML.jpg

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