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新属,新种,从南极腐烂海藻中分离得到。

gen. nov., sp. nov., isolated from Antarctic rotten seaweed.

机构信息

State Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao 266237, PR China.

College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou 310018, PR China.

出版信息

Int J Syst Evol Microbiol. 2020 Jan;70(1):648-655. doi: 10.1099/ijsem.0.003809.

Abstract

A Gram-stain-negative, pink-pigmented, rod-shaped, non-flagellated, aerobic bacterium, designated strain SM1701, was isolated from a rotten seaweed collected off Fildes Peninsula, King George Island, West Antarctica. The strain grew at 4-30 °C, pH 6.0-8.0 and with 0.5-5 % (w/v) NaCl. It hydrolysed gelatin and Tweens (40, 60 and 80), but did not reduce nitrates to nitrites. The major cellular fatty acids of strain SM1701 were iso-C, iso-CG, iso-CG, C and iso-C 3-OH. Polar lipids included phosphatidylethanolamine, one unidentified aminolipid, two unidentified glycolipids and one unidentified aminoglycolipid. The major respiratory quinone was MK-7. The genomic DNA G+C content of strain SM1701 was 34.1 mol%. It showed high 16S rRNA gene sequence similarities to (93.8 %) and (92.5 %) and less than 91 % sequence similarities to other known members in the family . Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain SM1701 constituted a distinct lineage within the family . The phylogenetic trees based on concatenated 261 protein sequences from genome sequences showed that strain SM1701 occupied a branch separated from those of known genera in the family of , indicating it may belong to a new genus. On the basis of the polyphasic characterization of strain SM1701 in this study, it is considered to represent a novel species in a new genus in the family , for which the name gen. nov., sp. nov. is proposed. The type strain is SM1701 (=KCTC 62302=NBRC 113201=CGMCC 1.16510).

摘要

一株革兰氏阴性、粉红色、杆状、非鞭毛、需氧细菌,被命名为 SM1701 菌株,从南极洲西部乔治王岛菲尔德斯半岛采集的腐烂海藻中分离得到。该菌株在 4-30°C、pH6.0-8.0 和 0.5-5%(w/v)NaCl 的条件下生长。它可以水解明胶和吐温(40、60 和 80),但不能将硝酸盐还原为亚硝酸盐。SM1701 菌株的主要细胞脂肪酸为 iso-C、iso-CG、iso-CG、C 和 iso-C3-OH。极性脂包括磷脂酰乙醇胺、一种未鉴定的胺脂、两种未鉴定的糖脂和一种未鉴定的氨基糖脂。主要呼吸醌为 MK-7。SM1701 菌株的基因组 DNA G+C 含量为 34.1mol%。它与 (93.8%)和 (92.5%)的 16S rRNA 基因序列相似度较高,与其他已知属的相似度低于 91%。基于 16S rRNA 基因序列的系统发育分析表明,SM1701 菌株构成了该科内的一个独特谱系。基于基因组序列中 261 个蛋白质序列的系统发育树表明,SM1701 菌株占据了与该科中已知属分离的分支,表明它可能属于一个新属。基于 SM1701 菌株的多相特征,它被认为代表了该科中一个新属的新种,建议将其命名为 属,新种,新种。模式菌株为 SM1701(=KCTC 62302=NBRC 113201=CGMCC 1.16510)。

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