Department of Biochemistry and Microbiology, Faculty of Science and Agriculture, University of Zululand, KwaDlangezwa 3886, South Africa.
Biological and Chemical Research Center, Faculty of Chemistry, University of Warsaw, Pasteura 1, 02-093 Warsaw, Poland.
Int J Mol Sci. 2022 May 2;23(9):5057. doi: 10.3390/ijms23095057.
Species belonging to the bacterial phyla and represent over 90% of the gastrointestinal microbiota. Changes in the ratio of these two bacterial groups were found to have contrasting health effects, including obesity and inflammatory diseases. Despite the availability of many bacterial genomes, comparative genomic studies on the gene pools of these two bacterial groups concerning cytochrome P450 monooxygenases (P450s), ferredoxins, and secondary metabolite biosynthetic gene clusters (smBGCs) are not reported. This study is aimed to address this research gap. The study revealed the presence of diverse sets of P450s, ferredoxins, and smBGCs in their genomes. species have the highest number of P450 families, ferredoxin cluster-types, and smBGCs compared to species. Only four P450 families, three ferredoxin cluster types, and five smBGCs are commonly shared between these two bacterial groups. Considering the above facts, we propose that the contrasting effects of these two bacterial groups on the host are partly due to the distinct nature of secondary metabolites produced by these organisms. Thus, the cause of the contrasting health effects of these two bacterial groups lies in their gene pools.
属于细菌门 和 的物种占胃肠道微生物群的 90%以上。这两组细菌比例的变化被发现具有相反的健康影响,包括肥胖和炎症性疾病。尽管有许多细菌基因组,但关于这两组细菌的细胞色素 P450 单加氧酶 (P450s)、铁氧还蛋白和次级代谢生物合成基因簇 (smBGCs) 的比较基因组研究尚未报道。本研究旨在解决这一研究空白。研究结果显示,它们的基因组中存在多种 P450s、铁氧还蛋白和 smBGCs。与 物种相比, 物种拥有最多的 P450 家族、铁氧还蛋白簇类型和 smBGCs。这两组细菌仅共享四个 P450 家族、三种铁氧还蛋白簇类型和五个 smBGCs。考虑到上述事实,我们提出这两组细菌对宿主的相反影响部分归因于这些生物体产生的次生代谢物的不同性质。因此,这两组细菌的相反健康影响的原因在于它们的基因库。