Department of Biochemistry and Microbiology, Faculty of Science and Agriculture, University of Zululand, KwaDlangezwa 3886, South Africa.
Department of Pharmaceutical Chemistry, College of Health Sciences, University of KwaZulu-Natal, Durban 4000, South Africa.
Int J Mol Sci. 2022 May 22;23(10):5821. doi: 10.3390/ijms23105821.
For the last six decades, cytochrome P450 monooxygenases (CYPs/P450s), heme thiolate proteins, have been under the spotlight due to their regio- and stereo-selective oxidation activities, which has led to the exploration of their applications in almost all known areas of biology. The availability of many genome sequences allows us to understand the evolution of P450s in different organisms, especially in the Bacteria domain. The phenomenon that "P450s play a key role in organisms' adaptation vis a vis lifestyle of organisms impacts P450 content in their genome" was proposed based on studies on a handful of individual bacterial groups. To have conclusive evidence, one must analyze P450s and their role in secondary metabolism in species with diverse lifestyles but that belong to the same category. We selected species of the phylum classes, , , , , and , to address this research gap due to their diverse lifestyle and ancient nature. The study identified that the lifestyle of alpha-, beta-, gamma-, delta-, and epsilon-proteobacterial species profoundly affected P450 profiles in their genomes. The study determined that irrespective of the species associated with different proteobacterial classes, pathogenic species or species adapted to a simple lifestyle lost or had few P450s in their genomes. On the contrary, species with saprophytic or complex lifestyles had many P450s and secondary metabolite biosynthetic gene clusters. The study findings prove that the phenomenon mentioned above is factual, and there is no link between the number and diversity of P450s and the age of the bacteria.
在过去的六十年中,细胞色素 P450 单加氧酶(CYPs/P450s)作为含血红素硫醇蛋白,因其区域和立体选择性氧化活性而备受关注,这促使人们探索其在几乎所有已知生物学领域的应用。许多基因组序列的出现使我们能够了解不同生物体中 P450 的进化,特别是在细菌域。“P450 在生物体适应生活方式方面发挥着关键作用,这影响了它们基因组中 P450 的含量”这一现象是基于对少数几个细菌群体的研究提出的。为了得出确凿的证据,人们必须分析具有不同生活方式但属于同一类别的物种中的 P450 及其在次生代谢中的作用。由于其生活方式多样且古老,我们选择了门纲 classes 、 、 、 、 和 的物种来填补这一研究空白。该研究表明,α-、β-、γ-、δ-和ε-变形菌门物种的生活方式深刻影响了它们基因组中 P450 的分布。研究确定,无论与不同变形菌门类群相关的物种是病原体还是适应简单生活方式的物种,它们的基因组中都失去或仅有少数 P450。相反,具有腐生或复杂生活方式的物种拥有许多 P450 和次生代谢物生物合成基因簇。研究结果证明了上述现象是真实存在的,并且 P450 的数量和多样性与细菌的年龄之间没有联系。