Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA, USA.
Division of Biological Sciences, University of California, San Diego, La Jolla, CA, USA.
Nature. 2020 Feb;578(7793):172-176. doi: 10.1038/s41586-019-1928-2. Epub 2020 Jan 22.
Many proteins exist naturally as symmetrical homooligomers or homopolymers. The emergent structural and functional properties of such protein assemblies have inspired extensive efforts in biomolecular design. As synthesized by ribosomes, proteins are inherently asymmetric. Thus, they must acquire multiple surface patches that selectively associate to generate the different symmetry elements needed to form higher-order architectures-a daunting task for protein design. Here we address this problem using an inorganic chemical approach, whereby multiple modes of protein-protein interactions and symmetry are simultaneously achieved by selective, 'one-pot' coordination of soft and hard metal ions. We show that a monomeric protein (protomer) appropriately modified with biologically inspired hydroxamate groups and zinc-binding motifs assembles through concurrent Fe and Zn coordination into discrete dodecameric and hexameric cages. Our cages closely resemble natural polyhedral protein architectures and are, to our knowledge, unique among designed systems in that they possess tightly packed shells devoid of large apertures. At the same time, they can assemble and disassemble in response to diverse stimuli, owing to their heterobimetallic construction on minimal interprotein-bonding footprints. With stoichiometries ranging from [2 Fe:9 Zn:6 protomers] to [8 Fe:21 Zn:12 protomers], these protein cages represent some of the compositionally most complex protein assemblies-or inorganic coordination complexes-obtained by design.
许多蛋白质天然存在为对称的同聚寡聚物或同聚物。这些蛋白质组装体的新兴结构和功能特性激发了生物分子设计的广泛努力。核糖体合成的蛋白质本质上是不对称的。因此,它们必须获得多个表面斑块,这些斑块选择性地结合以产生形成更高阶结构所需的不同对称元素——这对蛋白质设计来说是一项艰巨的任务。在这里,我们使用无机化学方法解决了这个问题,通过选择性的“一锅法”配位软金属和硬金属离子,同时实现了多种蛋白质-蛋白质相互作用和对称性。我们表明,经过适当修饰的具有生物启发的羟肟酸基团和锌结合基序的单体蛋白质(原体)通过铁和锌的同时配位组装成离散的十二聚体和六聚体笼。我们的笼非常类似于天然的多面体蛋白质结构,并且据我们所知,在具有紧密堆积的外壳而没有大孔的设计系统中是独一无二的。同时,由于其在最小的蛋白质间键足迹上的异双金属结构,它们可以响应各种刺激进行组装和拆卸。具有从 [2 Fe:9 Zn:6 protomers] 到 [8 Fe:21 Zn:12 protomers] 的化学计量比,这些蛋白质笼代表了通过设计获得的一些组成上最复杂的蛋白质组装体或无机配位化合物。