Department of Biotechnology, Delft University of Technology, Delft, The Netherlands.
Yeast. 2020 Apr;37(4):283-304. doi: 10.1002/yea.3461. Epub 2020 Feb 6.
Chemically defined media for yeast cultivation (CDMY) were developed to support fast growth, experimental reproducibility, and quantitative analysis of growth rates and biomass yields. In addition to mineral salts and a carbon substrate, popular CDMYs contain seven to nine B-group vitamins, which are either enzyme cofactors or precursors for their synthesis. Despite the widespread use of CDMY in fundamental and applied yeast research, the relation of their design and composition to the actual vitamin requirements of yeasts has not been subjected to critical review since their first development in the 1940s. Vitamins are formally defined as essential organic molecules that cannot be synthesized by an organism. In yeast physiology, use of the term "vitamin" is primarily based on essentiality for humans, but the genome of the Saccharomyces cerevisiae reference strain S288C harbours most of the structural genes required for synthesis of the vitamins included in popular CDMY. Here, we review the biochemistry and genetics of the biosynthesis of these compounds by S. cerevisiae and, based on a comparative genomics analysis, assess the diversity within the Saccharomyces genus with respect to vitamin prototrophy.
酵母培养的化学成分确定培养基(CDMY)的开发旨在支持快速生长、实验重现性以及生长速率和生物量产量的定量分析。除了矿物质盐和碳底物外,流行的 CDMY 还含有七种到九种 B 族维生素,这些维生素要么是酶的辅助因子,要么是其合成的前体。尽管 CDMY 在基础和应用酵母研究中得到了广泛应用,但自 20 世纪 40 年代首次开发以来,其设计和组成与酵母的实际维生素需求之间的关系尚未受到严格审查。维生素被正式定义为有机分子,生物体无法合成。在酵母生理学中,“维生素”一词主要基于对人类的必要性,但酿酒酵母参考菌株 S288C 的基因组包含了在流行的 CDMY 中包含的大多数合成这些化合物所需的结构基因。在这里,我们综述了 S. cerevisiae 合成这些化合物的生物化学和遗传学,并基于比较基因组学分析,评估了 Saccharomyces 属内维生素原养型的多样性。