The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA.
Department of Small Animal Clinical Sciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, TX 77843, USA.
Cancer Cell. 2020 Feb 10;37(2):243-257.e7. doi: 10.1016/j.ccell.2020.01.004.
Sporadic gliomas in companion dogs provide a window on the interaction between tumorigenic mechanisms and host environment. We compared the molecular profiles of canine gliomas with those of human pediatric and adult gliomas to characterize evolutionarily conserved mammalian mutational processes in gliomagenesis. Employing whole-genome, exome, transcriptome, and methylation sequencing of 83 canine gliomas, we found alterations shared between canine and human gliomas such as the receptor tyrosine kinases, TP53 and cell-cycle pathways, and IDH1 R132. Canine gliomas showed high similarity with human pediatric gliomas per robust aneuploidy, mutational rates, relative timing of mutations, and DNA-methylation patterns. Our cross-species comparative genomic analysis provides unique insights into glioma etiology and the chronology of glioma-causing somatic alterations.
散发性犬胶质母细胞瘤为研究肿瘤发生机制与宿主环境之间的相互作用提供了一个窗口。我们比较了犬胶质母细胞瘤与人类儿童和成人胶质母细胞瘤的分子谱,以阐明胶质母细胞瘤发生过程中进化保守的哺乳动物突变过程。通过对 83 例犬胶质母细胞瘤进行全基因组、外显子组、转录组和甲基化测序,我们发现了犬胶质母细胞瘤与人类胶质母细胞瘤之间存在共同的改变,如受体酪氨酸激酶、TP53 和细胞周期途径以及 IDH1 R132。犬胶质母细胞瘤与人类儿童胶质母细胞瘤具有高度相似性,表现为强大的非整倍性、突变率、突变的相对时间以及 DNA 甲基化模式。我们的跨物种比较基因组分析为胶质母细胞瘤的病因学和引起胶质母细胞瘤的体细胞改变的时间顺序提供了独特的见解。