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sp. nov.,分离自冲绳海槽南部沉积物,对科的描述进行了修正。

sp. nov., isolated from southern Okinawa Trough sediment and emended description of the family .

机构信息

College of Marine Life Sciences, Ocean University of China, Qingdao 266003, PR China.

Laboratory for Marine Ecology and Environmental Science, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266071, PR China.

出版信息

Int J Syst Evol Microbiol. 2020 Apr;70(4):2531-2536. doi: 10.1099/ijsem.0.004066. Epub 2020 Feb 20.

Abstract

A Gram-stain-negative, obligately anaerobic, non-motile, non-spore-forming, long-rod-shaped and non-flagellated bacterial strain, designated T3-2 S1-C, was isolated from a sediment sample collected at the Okinawa Trough. Phylogenetic analyses of 16S rRNA gene sequences and the whole genome revealed that strain T3-2 S1-C was a member of the family and exhibited less than 95.1 % sequence similarities to the closely related type strains of the family . Optimal growth occurred at pH 7.0, 28 °C and in the presence of 3 % (w/v) NaCl. The isoprenoid quinone of strain T3-2 S1-C was identified as menaquinone-7 (MK-7) and the predominant fatty acids (>10 %) were iso-C (38.9 %) and anteiso-C (11.6 %). The major polar lipids were one phosphatidylethanolamine, one phosphatidylmonomethylethanolamine, one aminolipids, two unidentified lipids and two unidentified phospholipids. The DNA G+C content of strain T3-2 S1-C was 35.7 mol%. On the basis of the results of polyphasic analyses, strain T3-2 S1-C is considered to represent a novel species of the genus , for which the name sp. nov. is proposed. The type strain is T3-2 S1-C (=KCTC 15505=MCCC 1K01617).

摘要

一株革兰氏阴性、严格厌氧菌、不运动、不产芽孢、长杆状、无鞭毛的细菌菌株,被命名为 T3-2 S1-C,从冲绳海槽的沉积物样本中分离得到。16S rRNA 基因序列和全基因组的系统发育分析表明,菌株 T3-2 S1-C 是 的成员,与该科的近缘模式菌株的序列相似度低于 95.1%。菌株 T3-2 S1-C 的最佳生长条件为 pH7.0、28°C 和 3%(w/v)NaCl。菌株 T3-2 S1-C 的异戊二烯醌为menaquinone-7(MK-7),主要脂肪酸(>10%)为 iso-C(38.9%)和 anteiso-C(11.6%)。主要极性脂为一个磷脂酰乙醇胺、一个磷脂单甲基乙醇胺、一个胺脂、两个未鉴定的脂类和两个未鉴定的磷脂。菌株 T3-2 S1-C 的 DNA G+C 含量为 35.7 mol%。基于多相分析的结果,菌株 T3-2 S1-C 被认为代表了一个新的属种,建议将其命名为 sp. nov.。其模式菌株为 T3-2 S1-C(=KCTC 15505=MCCC 1K01617)。

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