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新种短链海丝菌,一种从中国南海永乐蓝洞分离出的海洋细菌及海丝菌属的修订描述

Marinifilum breve sp. nov., a marine bacterium isolated from the Yongle Blue Hole in the South China Sea and emended description of the genus Marinifilum.

作者信息

Fu Tianyu, Jia Chao, Fu Liang, Zhou Shun, Yao Peng, Du Rui, Sun Hao, Yang Zuosheng, Shi Xiaochong, Zhang Xiao-Hua

机构信息

1​College of Marine Life Sciences, Ocean University of China, Qingdao 266003, PR China.

2​Sansha Track Ocean Coral Reef Conservation Research Institute, Sansha 573199, PR China.

出版信息

Int J Syst Evol Microbiol. 2018 Nov;68(11):3540-3545. doi: 10.1099/ijsem.0.003027. Epub 2018 Sep 19.

Abstract

A Gram-stain-negative, facultative anaerobic, non-motile, short-clavate and non-flagellated marine bacterium strain, designated JC075, was isolated from the Yongle Blue Hole in the South China Sea. Based on the 16S rRNA gene sequence, strain JC075 was found to be closely related to Marinifilum albidiflavum FB208 (97.10 %), Marinifilum flexuosum DSM 21950 (96.43 %) and Marinifilum fragile JCM 15579 (95.58 %), with less than 90.24 % sequence similarity to other genera of the family Marinifilaceae. The growth temperature was in the range of 10-37 °C, and the optimum temperature was 16 °C. Optimal growth occurred at pH 7.0 and in the presence of 3 % (w/v) NaCl. The isoprenoid quinone of strain JC075 was identified as menaquinone-7 and the predominant fatty acids (>10 %) were iso-C15 : 0 (47.9 %), summed feature 9 (C17 : 1 or/and iso-C17 : 1ω9c; 18.7 %) and iso-C17 : 0 3-OH (14.9 %). The major polar lipids were one phosphatidylethanolamine, one phospholipid, one aminophospholipid, one glycolipid, one aminolipid and two unidentified lipids. The DNA G+C content of strain JC075 was 35.8 mol%. On the basis of polyphasic analysis, strain JC075 was considered to represent a novel species of the genus Marinifilum, for which the name Marinifilumbreve sp. nov. is proposed. The type strain is JC075 (=KCTC 15646=MCCC 1K03477=JCM 32401).

摘要

从中国南海永乐蓝洞分离出一株革兰氏染色阴性、兼性厌氧、无运动性、短棒状且无鞭毛的海洋细菌,命名为JC075。基于16S rRNA基因序列,发现菌株JC075与白色海丝菌FB208(97.10%)、弯曲海丝菌DSM 21950(96.43%)和脆弱海丝菌JCM 15579(95.58%)密切相关,与海丝菌科其他属的序列相似性低于90.24%。生长温度范围为10 - 37°C,最适温度为16°C。在pH 7.0和3%(w/v)NaCl存在的条件下生长最佳。菌株JC075的类异戊二烯醌被鉴定为甲基萘醌-7,主要脂肪酸(>10%)为异C15:0(47.9%)、总和特征9(C17:1或/和异C17:1ω9c;18.7%)和异C17:0 3-OH(14.9%)。主要极性脂为一种磷脂酰乙醇胺、一种磷脂、一种氨基磷脂、一种糖脂、一种氨基脂和两种未鉴定的脂类。菌株JC075的DNA G+C含量为35.8 mol%。基于多相分析,菌株JC075被认为代表海丝菌属的一个新物种,为此提出新名称短海丝菌(Marinifilum breve sp. nov.)。模式菌株为JC075(=KCTC 15646 = MCCC 1K03477 = JCM 32401)。

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