• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

研究DNA双链断裂修复:一个不断扩充的工具箱。

Studying DNA Double-Strand Break Repair: An Ever-Growing Toolbox.

作者信息

Vítor Alexandra C, Huertas Pablo, Legube Gaëlle, de Almeida Sérgio F

机构信息

Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina da Universidade de Lisboa, Lisbon, Portugal.

Department of Genetics, University of Seville, Seville, Spain.

出版信息

Front Mol Biosci. 2020 Feb 21;7:24. doi: 10.3389/fmolb.2020.00024. eCollection 2020.

DOI:10.3389/fmolb.2020.00024
PMID:32154266
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7047327/
Abstract

To ward off against the catastrophic consequences of persistent DNA double-strand breaks (DSBs), eukaryotic cells have developed a set of complex signaling networks that detect these DNA lesions, orchestrate cell cycle checkpoints and ultimately lead to their repair. Collectively, these signaling networks comprise the DNA damage response (DDR). The current knowledge of the molecular determinants and mechanistic details of the DDR owes greatly to the continuous development of ground-breaking experimental tools that couple the controlled induction of DSBs at distinct genomic positions with assays and reporters to investigate DNA repair pathways, their impact on other DNA-templated processes and the specific contribution of the chromatin environment. In this review, we present these tools, discuss their pros and cons and illustrate their contribution to our current understanding of the DDR.

摘要

为抵御持续性DNA双链断裂(DSB)带来的灾难性后果,真核细胞已形成一套复杂的信号网络,用于检测这些DNA损伤、协调细胞周期检查点并最终实现修复。这些信号网络共同构成了DNA损伤反应(DDR)。目前关于DDR分子决定因素和机制细节的认识,在很大程度上归功于开创性实验工具的不断发展,这些工具将在不同基因组位置可控诱导DSB与检测方法和报告基因相结合,以研究DNA修复途径、其对其他DNA模板化过程的影响以及染色质环境的具体作用。在本综述中,我们介绍这些工具,讨论其优缺点,并阐述它们对我们当前理解DDR的贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/355b/7047327/0b31892edc73/fmolb-07-00024-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/355b/7047327/b01b56650320/fmolb-07-00024-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/355b/7047327/b00ada0d5e05/fmolb-07-00024-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/355b/7047327/0a899d16582b/fmolb-07-00024-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/355b/7047327/0b31892edc73/fmolb-07-00024-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/355b/7047327/b01b56650320/fmolb-07-00024-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/355b/7047327/b00ada0d5e05/fmolb-07-00024-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/355b/7047327/0a899d16582b/fmolb-07-00024-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/355b/7047327/0b31892edc73/fmolb-07-00024-g004.jpg

相似文献

1
Studying DNA Double-Strand Break Repair: An Ever-Growing Toolbox.研究DNA双链断裂修复:一个不断扩充的工具箱。
Front Mol Biosci. 2020 Feb 21;7:24. doi: 10.3389/fmolb.2020.00024. eCollection 2020.
2
A historical reflection on our understanding of radiation-induced DNA double strand break repair in somatic mammalian cells; interfacing the past with the present.对我们在体细胞哺乳动物细胞中对辐射诱导的 DNA 双链断裂修复的理解的历史反思;连接过去与现在。
Int J Radiat Biol. 2019 Jul;95(7):945-956. doi: 10.1080/09553002.2018.1564083. Epub 2019 Jan 17.
3
Pathways and assays for DNA double-strand break repair by homologous recombination.同源重组修复 DNA 双链断裂的途径和分析。
Acta Biochim Biophys Sin (Shanghai). 2019 Sep 6;51(9):879-889. doi: 10.1093/abbs/gmz076.
4
Live imaging of induced and controlled DNA double-strand break formation reveals extremely low repair by homologous recombination in human cells.活细胞成像技术诱导和检测 DNA 双链断裂的形成,揭示了人源细胞中同源重组修复的效率极低。
Oncogene. 2012 Jul 26;31(30):3495-504. doi: 10.1038/onc.2011.516. Epub 2011 Nov 21.
5
Induction and repair of DNA double strand breaks: the increasing spectrum of non-homologous end joining pathways.DNA 双链断裂的诱导和修复:非同源末端连接途径的不断增加。
Mutat Res. 2011 Jun 3;711(1-2):61-72. doi: 10.1016/j.mrfmmm.2011.02.005. Epub 2011 Feb 15.
6
Making Connections: Integrative Signaling Mechanisms Coordinate DNA Break Repair in Chromatin.建立联系:整合信号机制协调染色质中的DNA断裂修复
Front Genet. 2021 Sep 29;12:747734. doi: 10.3389/fgene.2021.747734. eCollection 2021.
7
Efficient repair of DNA double strand breaks in individuals from high level natural radiation areas of Kerala coast, south-west India.印度西南部喀拉拉邦海岸高天然辐射地区个体中DNA双链断裂的高效修复
Mutat Res. 2017 Dec;806:39-50. doi: 10.1016/j.mrfmmm.2017.09.003. Epub 2017 Sep 20.
8
Mechanisms and Consequences of Double-Strand DNA Break Formation in Chromatin.染色质中双链DNA断裂形成的机制与后果
J Cell Physiol. 2016 Jan;231(1):3-14. doi: 10.1002/jcp.25048.
9
Genomic rearrangements induced by unscheduled DNA double strand breaks in somatic mammalian cells.体细胞哺乳动物细胞中未计划的 DNA 双链断裂诱导的基因组重排。
FEBS J. 2017 Aug;284(15):2324-2344. doi: 10.1111/febs.14053. Epub 2017 Mar 22.
10
DNA double-strand-break repair in higher eukaryotes and its role in genomic instability and cancer: Cell cycle and proliferation-dependent regulation.真核生物中 DNA 双链断裂的修复及其在基因组不稳定性和癌症中的作用:细胞周期和增殖依赖性调控。
Semin Cancer Biol. 2016 Jun;37-38:51-64. doi: 10.1016/j.semcancer.2016.03.003. Epub 2016 Mar 22.

引用本文的文献

1
mtgRNA-db: An annotated database of multi-target CRISPR-Cas9 guide-RNAs in the human genome.mtgRNA-db:人类基因组中多靶点CRISPR-Cas9引导RNA的注释数据库。
bioRxiv. 2025 May 10:2025.05.07.652656. doi: 10.1101/2025.05.07.652656.
2
5hmC enhances PARP trapping and restores PARP inhibitor sensitivity in chemoresistant BRCA1/2-deficient cells.5-羟甲基胞嘧啶增强PARP捕获并恢复化疗耐药的BRCA1/2缺陷细胞对PARP抑制剂的敏感性。
J Biol Chem. 2025 Jul;301(7):110393. doi: 10.1016/j.jbc.2025.110393. Epub 2025 Jun 19.
3
Combinational Radiotherapies Improve Brain Cancer Treatment at High Dose Rates In Vitro.

本文引用的文献

1
A chromatin-based signalling mechanism directs the switch from mutagenic to error-free repair of DNA double strand breaks.一种基于染色质的信号传导机制指导DNA双链断裂从诱变修复向无差错修复的转变。
Mol Cell Oncol. 2019 May 7;6(4):1605820. doi: 10.1080/23723556.2019.1605820. eCollection 2019.
2
Topoisomerase II-Induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional Activity.拓扑异构酶 II 诱导的染色体断裂和易位由染色体结构和转录活性决定。
Mol Cell. 2019 Jul 25;75(2):252-266.e8. doi: 10.1016/j.molcel.2019.04.030. Epub 2019 Jun 12.
3
Spatial Chromosome Folding and Active Transcription Drive DNA Fragility and Formation of Oncogenic MLL Translocations.
联合放射疗法在高剂量率下体外改善脑癌治疗效果。
Cancers (Basel). 2025 May 20;17(10):1713. doi: 10.3390/cancers17101713.
4
Therapy enhancing chromosome instability may be advantageous for gliomas.增强染色体不稳定性的疗法可能对神经胶质瘤有利。
NAR Cancer. 2025 Feb 13;7(1):zcaf003. doi: 10.1093/narcan/zcaf003. eCollection 2025 Mar.
5
Microbeam Radiation Therapy Bio-Dosimetry Enhanced by Novel Radiosensitiser Combinations in the Treatment of Brain Cancer.新型放射增敏剂组合增强微束放射治疗在脑癌治疗中的生物剂量测定
Cancers (Basel). 2024 Dec 19;16(24):4231. doi: 10.3390/cancers16244231.
6
A novel approach to double-strand DNA break analysis through γ-H2AX confocal image quantification and bio-dosimetry.通过γ-H2AX 共聚焦图像定量分析和生物剂量学对双链 DNA 断裂的分析的新方法。
Sci Rep. 2024 Nov 11;14(1):27591. doi: 10.1038/s41598-024-76683-5.
7
HPV and p53 Status as Precision Determinants of Head and Neck Cancer Response to DNA-PKcs Inhibition in Combination with Irradiation.人乳头瘤病毒(HPV)和p53状态作为头颈部癌对DNA依赖蛋白激酶催化亚基(DNA-PKcs)抑制联合放疗反应的精准决定因素
Mol Cancer Ther. 2025 Feb 4;24(2):214-229. doi: 10.1158/1535-7163.MCT-23-0794.
8
Regulation of Precise DNA Repair by Nuclear Actin Polymerization: A Chance for Improving Gene Therapy?核肌动蛋白聚合对精确 DNA 修复的调控:改善基因治疗的机会?
Cells. 2024 Jun 24;13(13):1093. doi: 10.3390/cells13131093.
9
Multivalent interactions of the disordered regions of XLF and XRCC4 foster robust cellular NHEJ and drive the formation of ligation-boosting condensates in vitro.无序区的多功能相互作用促进了 XLF 和 XRCC4 的强大细胞 NHEJ,并在体外驱动连接增强凝聚物的形成。
Nat Struct Mol Biol. 2024 Nov;31(11):1732-1744. doi: 10.1038/s41594-024-01339-x. Epub 2024 Jun 19.
10
Progression of monoclonal gammopathy of undetermined significance to multiple myeloma is associated with enhanced translational quality control and overall loss of surface antigens.意义未明的单克隆丙种球蛋白血症进展为多发性骨髓瘤与翻译质量控制增强和表面抗原整体丢失有关。
J Transl Med. 2024 Jun 7;22(1):548. doi: 10.1186/s12967-024-05345-x.
空间染色体折叠和活跃转录导致 DNA 脆弱性和致癌性 MLL 易位的形成。
Mol Cell. 2019 Jul 25;75(2):267-283.e12. doi: 10.1016/j.molcel.2019.05.015. Epub 2019 Jun 12.
4
Double-strand breaks in ribosomal RNA genes activate a distinct signaling and chromatin response to facilitate nucleolar restructuring and repair.核糖体 RNA 基因中的双链断裂会激活一种独特的信号转导和染色质反应,以促进核仁重构和修复。
Nucleic Acids Res. 2019 Sep 5;47(15):8019-8035. doi: 10.1093/nar/gkz518.
5
WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.WWP2 使 RNA 聚合酶 II 泛素化,导致 DNA 断裂处的 DNA-PK 依赖性转录停滞和修复。
Genes Dev. 2019 Jun 1;33(11-12):684-704. doi: 10.1101/gad.321943.118. Epub 2019 May 2.
6
RNase A treatment and reconstitution with DNA damage response RNA in living cells as a tool to study the role of non-coding RNA in the formation of DNA damage response foci.在活细胞中使用 RNase A 处理和与 DNA 损伤反应 RNA 重组作为研究非编码 RNA 在 DNA 损伤反应焦点形成中的作用的工具。
Nat Protoc. 2019 May;14(5):1489-1508. doi: 10.1038/s41596-019-0147-5. Epub 2019 Apr 8.
7
A Snapshot on the Cis Chromatin Response to DNA Double-Strand Breaks.DNA 双链断裂的顺式染色质反应概述。
Trends Genet. 2019 May;35(5):330-345. doi: 10.1016/j.tig.2019.02.003. Epub 2019 Mar 18.
8
H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.BRCA1-BARD1 识别 H4K20me0 可将同源重组引导至姐妹染色单体。
Nat Cell Biol. 2019 Mar;21(3):311-318. doi: 10.1038/s41556-019-0282-9. Epub 2019 Feb 25.
9
Tyrosine kinase c-Abl couples RNA polymerase II transcription to DNA double-strand breaks.酪氨酸激酶 c-Abl 将 RNA 聚合酶 II 转录与 DNA 双链断裂偶联。
Nucleic Acids Res. 2019 Apr 23;47(7):3467-3484. doi: 10.1093/nar/gkz024.
10
Single-molecule imaging of transcription at damaged chromatin.在受损染色质上进行转录的单分子成像。
Sci Adv. 2019 Jan 9;5(1):eaau1249. doi: 10.1126/sciadv.aau1249. eCollection 2019 Jan.