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通过力追踪和分子动力学模拟揭示的单个葡萄糖分子转运过程

Single glucose molecule transport process revealed by force tracing and molecular dynamics simulations.

作者信息

Pan Yangang, Zhang Yuebin, Gongpan Pianchou, Zhang Qingrong, Huang Siteng, Wang Bin, Xu Bingqian, Shan Yuping, Xiong Wenyong, Li Guohui, Wang Hongda

机构信息

State Key Laboratory of Electroanalytical Chemistry, Research Center of Biomembranomics, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, P. R. China.

出版信息

Nanoscale Horiz. 2018 Sep 1;3(5):517-524. doi: 10.1039/c8nh00056e. Epub 2018 May 8.

DOI:10.1039/c8nh00056e
PMID:32254137
Abstract

Transporting individual molecules across cell membranes is a fundamental process in cellular metabolism. Although the crystal diffraction technique has greatly contributed to our understanding of the structures of the involved transporters, a description of the dynamic transport mechanism at the single-molecule level has been extremely elusive. In this study, we applied atomic force microscopy (AFM)-based force tracing to directly monitor the transport of a single molecule, d-glucose, across living cell membranes. Our results show that the force to transport a single molecule of d-glucose across cell membranes is 37 ± 9 pN, and the corresponding transport interval is approximately 20 ms, while the average speed is approximately 0.3 μm s. Furthermore, our calculated force profile from molecular dynamics simulations showed quantitatively good agreement with the force tracing observation and revealed detailed information regarding the glucose transport path, indicating that two salt bridges, K38/E299 and K300/E426, play critical roles during glucose transport across glucose transporter 1 (GLUT1). This role was further verified using biological experiments that disrupted these two bridges and measured the uptake of glucose into the cells. Our approaches led to the first unambiguous description of the glucose transport process across cell membranes at the single-molecule level and demonstrated the biological importance of the two salt bridges for transporting glucose across GLUT1.

摘要

将单个分子转运穿过细胞膜是细胞代谢中的一个基本过程。尽管晶体衍射技术极大地促进了我们对相关转运蛋白结构的理解,但在单分子水平上对动态转运机制的描述却极其难以捉摸。在本研究中,我们应用基于原子力显微镜(AFM)的力追踪技术直接监测单个分子——d-葡萄糖——穿过活细胞膜的转运过程。我们的结果表明,将单个d-葡萄糖分子转运穿过细胞膜所需的力为37±9皮牛,相应的转运间隔约为20毫秒,平均速度约为0.3微米/秒。此外,我们从分子动力学模拟计算得到的力分布图与力追踪观测结果在定量上吻合良好,并揭示了有关葡萄糖转运路径的详细信息,表明两个盐桥K38/E299和K300/E426在葡萄糖通过葡萄糖转运蛋白1(GLUT1)进行转运的过程中起着关键作用。利用破坏这两个盐桥并测量葡萄糖进入细胞摄取量的生物学实验进一步验证了这一作用。我们的方法首次在单分子水平上明确描述了葡萄糖穿过细胞膜的转运过程,并证明了这两个盐桥对于葡萄糖通过GLUT1进行转运的生物学重要性。

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