Department of Orthopedic Surgery, Tongji Hospital, Tongji University School of Medicine, Shanghai, China (mainland).
Department of Orthopedic Surgery, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Med Sci Monit. 2020 Apr 7;26:e923331. doi: 10.12659/MSM.923331.
BACKGROUND Osteoarthritis (OA) is a common disorder in the elderly. OA influences the daily life of patients and has become a worldwide health problem. It is still unclear whether the pathogenesis mechanism is different between males and females. This study investigated the differentially expressed genes (DEGs) and explored the different signaling pathways of OA between males and females. MATERIAL AND METHODS Data sets of GSE55457, GSE55584, and GSE12021 were retrieved from Gene Expression Omnibus to conduct DEGs analysis. Enrichment analysis of Kyoto Encyclopedia of Genes and Genomes pathway and Gene Ontology term was performed using the Database for Annotation, Visualization and Integrated Discovery (DAVID) bioinformatics tool. The protein interaction network was constructed in Cytoscape 3.7.2. qRT-PCR was then performed to validate the expression of hub genes in OA patients and healthy people. RESULTS In total, 4 co-upregulated and 10 co-downregulated genes were identified. We found that enriched pathways were different between males and females. BCL2L1, EEF1A1, EEF2, HNRNPD, and PABPN1 were considered as hub genes in OA pathogenesis in males, while EEF2, EEF1A1, RPL37A, FN1 were considered as hub genes in OA pathogenesis in females. Consistent with the bioinformatics analysis, the qRT-PCR analysis also showed that the gene expression of BCL2L1, HNRNPD, and PABPN1 was significantly lower in male OA patients. In contrast, EEF2, EEF1A1, and RPL37A were significantly lower in female OA patients. CONCLUSIONS The DEGs identified may be involved in different OA disease progression mechanisms between males and females, and they are considered as treatment targets or prognosis markers for males and females. The pathogenesis mechanism is sex-dependent.
骨关节炎(OA)是老年人常见的疾病。OA 影响患者的日常生活,已成为全球性的健康问题。目前尚不清楚男性和女性的发病机制是否不同。本研究旨在探讨 OA 男女之间差异表达基因(DEGs)和不同信号通路。
从基因表达综合数据库中检索 GSE55457、GSE55584 和 GSE12021 数据集,进行 DEGs 分析。使用数据库注释、可视化和综合发现(DAVID)生物信息学工具进行京都基因与基因组百科全书(KEGG)通路和基因本体论(GO)术语的富集分析。在 Cytoscape 3.7.2 中构建蛋白质相互作用网络。然后进行 qRT-PCR 以验证 OA 患者和健康人群中关键基因的表达。
共鉴定出 4 个上调共表达基因和 10 个下调共表达基因。我们发现男性和女性之间的富集通路不同。在男性 OA 发病机制中,BCL2L1、EEF1A1、EEF2、HNRNPD 和 PABPN1 被认为是关键基因,而在女性 OA 发病机制中,EEF2、EEF1A1、RPL37A 和 FN1 被认为是关键基因。与生物信息学分析一致,qRT-PCR 分析还显示,男性 OA 患者的 BCL2L1、HNRNPD 和 PABPN1 基因表达明显降低。相比之下,女性 OA 患者的 EEF2、EEF1A1 和 RPL37A 基因表达明显降低。
本研究发现的 DEGs 可能参与了男性和女性 OA 疾病进展机制的不同,它们被认为是男性和女性的治疗靶点或预后标志物。发病机制具有性别依赖性。