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Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center.全细菌生物信息学数据库与分析资源中心PATRIC的改进。
Nucleic Acids Res. 2017 Jan 4;45(D1):D535-D542. doi: 10.1093/nar/gkw1017. Epub 2016 Nov 29.
2
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
3
Staphylococcus epidermidis in urine is not always benign: a case report of pyelonephritis in a child.尿液中的表皮葡萄球菌并不总是无害的：一例儿童肾盂肾炎病例报告。
J Am Board Fam Med. 2015 Jan-Feb;28(1):151-3. doi: 10.3122/jabfm.2015.01.140118.
4
Coagulase-negative staphylococci.凝固酶阴性葡萄球菌
Clin Microbiol Rev. 2014 Oct;27(4):870-926. doi: 10.1128/CMR.00109-13.
5
Urine is not sterile: use of enhanced urine culture techniques to detect resident bacterial flora in the adult female bladder.尿液并非无菌：采用强化尿液培养技术检测成年女性膀胱中的常驻细菌菌群。
J Clin Microbiol. 2014 Mar;52(3):871-6. doi: 10.1128/JCM.02876-13. Epub 2013 Dec 26.
6
Staphylococcus epidermidis Urinary Tract Infection in an Infant.婴儿的表皮葡萄球菌尿路感染
Case Rep Infect Dis. 2012;2012:983153. doi: 10.1155/2012/983153. Epub 2012 Aug 9.
7
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
8
Evidence of uncultivated bacteria in the adult female bladder.成年女性膀胱中未培养细菌的证据。
J Clin Microbiol. 2012 Apr;50(4):1376-83. doi: 10.1128/JCM.05852-11. Epub 2012 Jan 25.
9
Staphylococcus epidermidis--the 'accidental' pathogen.表皮葡萄球菌——“偶然”的病原体。
Nat Rev Microbiol. 2009 Aug;7(8):555-67. doi: 10.1038/nrmicro2182.

从女性尿道分离出的表皮葡萄球菌UMB8493的基因组序列草图

Draft Genome Sequence of Staphylococcus epidermidis UMB8493, Isolated from the Female Urinary Tract.

作者信息

Truckenbrod Anthony, Miller-Ensminger Taylor, Voukadinova Adelina, Wolfe Alan J, Putonti Catherine

机构信息

Department of Biology, Loyola University Chicago, Chicago, Illinois, USA.

Bioinformatics Program, Loyola University Chicago, Chicago, Illinois, USA.

出版信息

Microbiol Resour Announc. 2020 Jun 4;9(23):e00419-20. doi: 10.1128/MRA.00419-20.

DOI:10.1128/MRA.00419-20
PMID:32499349
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7272558/
Abstract

is a native member of the human microbiota. Here, we report the draft genome sequence of UMB8493, an isolate from a catheterized urine sample from a female with overactive bladder symptoms. The 2.54-Mbp draft genome encodes genes associated with beta-lactam and fosfomycin resistance.

摘要

是人类微生物群的天然成员。在此，我们报告了UMB8493的基因组草图序列，该菌株分离自一名患有膀胱过度活动症症状女性的导尿尿液样本。这个2.54兆碱基对的基因组草图编码了与β-内酰胺和磷霉素抗性相关的基因。