Linke Heiner, Höcker Birte, Furuta Ken'ya, Forde Nancy R, Curmi Paul M G
NanoLund and Solid State Physics, Lund University, Box 118, SE 22100, Lund, Sweden.
Department of Biochemistry, University of Bayreuth, 95447, Bayreuth, Germany.
Biophys Rev. 2020 Aug;12(4):1041-1054. doi: 10.1007/s12551-020-00717-1. Epub 2020 Jul 10.
Molecular motors and machines are essential for all cellular processes that together enable life. Built from proteins with a wide range of properties, functionalities and performance characteristics, biological motors perform complex tasks and can transduce chemical energy into mechanical work more efficiently than human-made combustion engines. Sophisticated studies of biological protein motors have provided many structural and biophysical insights and enabled the development of models for motor function. However, from the study of highly evolved, biological motors, it remains difficult to discern detailed mechanisms, for example, about the relative role of different force generation mechanisms, or how information is communicated across a protein to achieve the necessary coordination. A promising, complementary approach to answering these questions is to build synthetic protein motors from the bottom up. Indeed, much effort has been invested in functional protein design, but so far, the "holy grail" of designing and building a functional synthetic protein motor has not been realized. Here, we review the progress made to date, and we put forward a roadmap for achieving the aim of constructing the first artificial, autonomously running protein motor. Specifically, we propose to break down the task into (i) enzymatic control of track binding, (ii) the engineering of asymmetry and (iii) the engineering of allosteric control for internal communication. We also propose specific approaches for solving each of these challenges.
分子马达和分子机器对于所有共同维持生命的细胞过程至关重要。生物马达由具有广泛性质、功能和性能特征的蛋白质构建而成,能执行复杂任务,且将化学能转化为机械功的效率高于人造内燃机。对生物蛋白质马达的深入研究提供了许多结构和生物物理方面的见解,并推动了马达功能模型的发展。然而,从对高度进化的生物马达的研究中,仍难以辨别详细机制,例如不同力产生机制的相对作用,或者信息如何在蛋白质中传递以实现必要的协调。一种有望回答这些问题的补充方法是自下而上构建合成蛋白质马达。确实,在功能性蛋白质设计方面已投入大量努力,但迄今为止,设计和构建功能性合成蛋白质马达这一“圣杯”尚未实现。在此,我们回顾了迄今为止取得的进展,并提出了实现构建首个自主运行的人工蛋白质马达这一目标的路线图。具体而言,我们建议将任务分解为:(i)对轨道结合的酶促控制;(ii)不对称性工程;(iii)用于内部通讯的变构控制工程。我们还提出了解决这些挑战的具体方法。