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使用对抗网络架构从心脏电影磁共振成像中自动分割心脏腔室

Automated Segmentation of Cardiac Chambers from Cine Cardiac MRI Using an Adversarial Network Architecture.

作者信息

Upendra Roshan Reddy, Dangi Shusil, Linte Cristian A

机构信息

Center for Imaging Science, Rochester Institute of Technology, Rochester, NY, USA.

Biomedical Engineering, Rochester Institute of Technology, Rochester, NY, USA.

出版信息

Proc SPIE Int Soc Opt Eng. 2020 Feb;11315. doi: 10.1117/12.2550656. Epub 2020 Mar 16.

DOI:10.1117/12.2550656
PMID:32699460
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7375745/
Abstract

Cine cardiac magnetic resonance imaging (CMRI), the current gold standard for cardiac function analysis, provides images with high spatio-temporal resolution. Computing clinical cardiac parameters like ventricular blood-pool volumes, ejection fraction and myocardial mass from these high resolution images is an important step in cardiac disease diagnosis, therapy planning and monitoring cardiac health. An accurate segmentation of left ventricle blood-pool, myocardium and right ventricle blood-pool is crucial for computing these clinical cardiac parameters. U-Net inspired models are the current state-of-the-art for medical image segmentation. SegAN, a novel adversarial network architecture with multi-scale loss function, has shown superior segmentation performance over U-Net models with single-scale loss function. In this paper, we compare the performance of stand-alone U-Net models and U-Net models in SegAN framework for segmentation of left ventricle blood-pool, myocardium and right ventricle blood-pool from the 2017 ACDC segmentation challenge dataset. The mean Dice scores achieved by training U-Net models was on the order of 89.03%, 89.32% and 88.71% for left ventricle blood-pool, myocardium and right ventricle blood-pool, respectively. The mean Dice scores achieved by training the U-Net models in SegAN framework are 91.31%, 88.68% and 90.93% for left ventricle blood-pool, myocardium and right ventricle blood-pool, respectively.

摘要

心脏磁共振成像(CMRI)是目前心脏功能分析的金标准,可提供具有高时空分辨率的图像。从这些高分辨率图像中计算诸如心室血池容积、射血分数和心肌质量等临床心脏参数,是心脏病诊断、治疗规划和心脏健康监测中的重要步骤。准确分割左心室血池、心肌和右心室血池对于计算这些临床心脏参数至关重要。受U-Net启发的模型是目前医学图像分割的最先进技术。SegAN是一种具有多尺度损失函数的新型对抗网络架构,已显示出比具有单尺度损失函数的U-Net模型更优的分割性能。在本文中,我们比较了独立U-Net模型和SegAN框架中的U-Net模型在从2017年ACDC分割挑战数据集中分割左心室血池、心肌和右心室血池方面的性能。训练U-Net模型分别在左心室血池、心肌和右心室血池上获得的平均Dice分数约为89.03%、89.32%和88.71%。在SegAN框架中训练U-Net模型分别在左心室血池、心肌和右心室血池上获得的平均Dice分数为91.31%、88.68%和90.93%。

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本文引用的文献

1
An Adversarial Network Architecture Using 2D U-Net Models for Segmentation of Left Ventricle from Cine Cardiac MRI.一种使用二维U-Net模型从心脏电影磁共振成像中分割左心室的对抗网络架构。
Funct Imaging Model Heart. 2019 Jun;11504:415-424. doi: 10.1007/978-3-030-21949-9_45. Epub 2019 May 30.
2
SegAN: Adversarial Network with Multi-scale L Loss for Medical Image Segmentation.SegAN: 用于医学图像分割的多尺度 L 损失对抗网络。
Neuroinformatics. 2018 Oct;16(3-4):383-392. doi: 10.1007/s12021-018-9377-x.
3
A review of heart chamber segmentation for structural and functional analysis using cardiac magnetic resonance imaging.
使用心脏磁共振成像进行心脏腔室分割以进行结构和功能分析的综述。
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A review of segmentation methods in short axis cardiac MR images.短轴心脏磁共振图像分割方法综述。
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