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基于计算机预测鉴定编码枯草溶菌素(subtilase)的全部基因,并对其在小麦抗条锈病中的作用进行特征描述。

In Silico Identification of the Full Complement of Subtilase-Encoding Genes and Characterization of the Role of in Resistance Against Stripe Rust in Wheat.

机构信息

College of Plant Protection, Southwest University, Chongqing 400715, China.

Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, MD 20850, U.S.A.

出版信息

Phytopathology. 2021 Feb;111(2):398-407. doi: 10.1094/PHYTO-05-20-0176-R. Epub 2020 Nov 19.

Abstract

Plant subtilases (SBTs) or subtilisin-like proteases comprise a very diverse family of serine peptidases that participates in a broad spectrum of biological functions. Despite increasing evidence for roles of SBTs in plant immunity in recent years, little is known about wheat () SBTs (TaSBTs). Here, we identified 255 genes from bread wheat using the latest version 2.0 of the reference genome sequence. The SBT family can be grouped into five clades, from TaSBT1 to TaSBT5, based on a phylogenetic tree constructed with deduced protein sequences. In silico protein-domain analysis revealed the existence of considerable sequence diversification of the TaSBT family which, together with the local clustered gene distribution, suggests that genes have undergone extensive functional diversification. Among those genes whose expression was altered by biotic factors, was found to be induced in wheat leaves by chitin and flg22 elicitors, as well as six examined pathogens, implying a role for in plant defense. Transient overexpression of in leaves resulted in necrotic cell death. Moreover, knocking down in wheat using barley stripe mosaic virus-induced gene silencing compromised the hypersensitive response and resistance against f. sp. , the causal agent of wheat stripe rust. Taken together, this study defined the full complement of wheat genes and provided evidence for a positive role of one particular member, , in the incompatible interaction between wheat and a stripe rust pathogen.

摘要

植物丝氨酸内肽酶(SBTs)或枯草溶菌素蛋白酶构成了一个非常多样化的丝氨酸肽酶家族,参与了广泛的生物学功能。尽管近年来越来越多的证据表明 SBTs 在植物免疫中发挥作用,但对小麦(Triticum aestivum)SBTs(TaSBTs)的了解甚少。在这里,我们使用最新的参考基因组序列 2.0 版本从面包小麦中鉴定了 255 个基因。根据推导的蛋白质序列构建的系统发育树,SBT 家族可以分为五个分支,从 TaSBT1 到 TaSBT5。计算机蛋白质结构域分析揭示了 TaSBT 家族存在相当大的序列多样化,再加上局部聚集的基因分布,表明 个基因经历了广泛的功能多样化。在那些表达受生物因素改变的基因中,发现 基因被几丁质和 flg22 诱导物以及六种受检病原体诱导,表明 在植物防御中发挥作用。在 叶片中转基因瞬时过表达导致坏死性细胞死亡。此外,使用大麦条纹花叶病毒诱导的基因沉默在小麦中敲低 基因会削弱对小麦条锈病病原体的过敏反应和抗性。综上所述,本研究定义了小麦 基因的完整组成,并为一个特定成员 在小麦与条锈病病原体之间的不亲和相互作用中的积极作用提供了证据。

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