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中国东北地区从貂粪便拭子中检测到的貂阿留申病病毒的分子流行病学研究。

Molecular epidemiology of Aleutian mink disease virus from fecal swab of mink in northeast China.

机构信息

School of Basic Medical Sciences, Shanxi Medical University, Taiyuan, Shanxi province, P. R. China.

Institute of Special Wild Economic Animal and Plant Science, Chinese Academy of Agricultural Sciences, 4899 Juye Street, Changchun, 130122, Jilin Province, P. R. China.

出版信息

BMC Microbiol. 2020 Aug 1;20(1):234. doi: 10.1186/s12866-020-01910-8.

Abstract

BACKGROUND

Aleutian mink disease parvovirus (AMDV) causes Aleutian mink disease (AMD), which is a serious infectious disease of mink. The aim of this study was to get a better understanding of the molecular epidemiology of AMDV in northeast China to control and prevent AMD from further spreading. This study for the first time isolated AMDV from fecal swab samples of mink in China.

RESULTS

A total of 157/291 (54.0%) of the fecal swab samples were positive for AMDV. Of these, 23 AMDV positive samples were randomly selected for sequence alignment and phylogenetic analysis based on the acquired partial fragments of VP2 gene with the hypervariable region. Comparative DNA sequence analysis of 23 AMDV isolates with a reference nonpathogenic (AMDV-G) strain revealed 8.3% difference in partial VP2 nucleotide sequences. Amino acid alignment indicated the presence of several genetic variants, as well as one single amino acid residue deletion. The most concentrated area of variation was located in the hypervariable region of VP2 protein. According to phylogenetic analysis, the Chinese AMDV strains and the other reference AMDV strains from different countries clustered into three groups (clades A, B and C). Most of the newly sequenced strains were found to form a Chinese-specific group, which solely consisted of Chinese AMDV strains.

CONCLUSION

These findings indicated that a high genetic diversity was found in Chinese AMDV strains and the virus distribution were not dependent on geographical origin. Both local and imported AMDV positive species were prevalent in the Chinese mink farming population. The genetic evidence of AMDV variety and epidemic isolates have importance in mink farming practice.

摘要

背景

阿留申病病毒(AMDV)引起阿留申病(AMD),这是一种严重的貂传染病。本研究旨在更好地了解中国东北地区 AMDV 的分子流行病学,以控制和防止 AMD 进一步传播。本研究首次从中国貂的粪便拭子样本中分离出 AMDV。

结果

共有 291 份粪便拭子样本中的 157 份(54.0%)为 AMDV 阳性。其中,随机选择了 23 个 AMDV 阳性样本,根据获得的 VP2 基因部分片段和高变区进行序列比对和系统发育分析。对 23 个 AMDV 分离株与非致病性(AMDV-G)株的部分 VP2 核苷酸序列进行比较 DNA 序列分析,发现部分 VP2 核苷酸序列存在 8.3%的差异。氨基酸比对表明存在多种遗传变异,以及一个单一的氨基酸残基缺失。变异最集中的区域位于 VP2 蛋白的高变区。根据系统发育分析,中国 AMDV 株和来自不同国家的其他参考 AMDV 株聚类为三个组(分支 A、B 和 C)。新测序的菌株大多形成一个中国特有的群体,仅由中国 AMDV 株组成。

结论

这些发现表明,中国 AMDV 株存在高度遗传多样性,病毒分布不依赖于地理起源。本地和进口的 AMDV 阳性物种在中国貂养殖群体中普遍存在。AMDV 品种和流行分离株的遗传证据对貂养殖实践具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9b/7395966/154c7af214cd/12866_2020_1910_Fig1_HTML.jpg

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