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sp. nov.,分离自湖泊沉积物。

sp. nov., isolated from lake sediment.

机构信息

Marine College, Shandong University, Weihai, Shandong, 264209, PR China.

State Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong, 266237, PR China.

出版信息

Int J Syst Evol Microbiol. 2020 Oct;70(10):5473-5478. doi: 10.1099/ijsem.0.004436. Epub 2020 Sep 4.

Abstract

A Gram-stain-negative, non-motile, coccus-shaped, catalase- and oxidase-positive, facultatively anaerobic and pink-pigmented bacterium, designated strain CQN31, was isolated from sediment of Changqiaohai Lake, Yunnan Province, China. Growth occurred at 4-45 °C (optimum, 37 °C), at pH 6.5-9.5 (optimum, pH 8.0) and with 0-1 % (w/v) NaCl (optimum, 0 %). C 7/C 6 and C were the predominant fatty acids. Phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), diphosphatidylglycerol (DPG), phosphatidyldimethylethanolamine (PME) and one unidentified aminolipid (AL) were the major polar lipids. The G+C content of the genomic DNA was 71.5 %. 16S rRNA gene sequence comparisons indicated that strain CQN31 shared 96.8 % similarity with JCM 19527 and 95.9 % with EM0302. Digital DNA-DNA hybridization values between strain CQN31 and DSM 19981, DSM 14916 and NCTC 13291 were 21.0, 19.4 and 19.8 %, respectively. Average amino acid identity and average nucleotide identity values between strain CQN31 and DSM 19981, DSM 14916 and NCTC 13291 were 73.7, 63.4 and 61.9 %, and 79.2, 77.1 and 77.5%, respectively. Distinct morphological, physiological and genotypic differences from previously described taxa support the classification of strain CQN31 as a representative of a novel species in the genus , for which the name sp. nov. is proposed. The type strain is CQN31 (=KCTC 62447=MCCC 1H00309).

摘要

一株革兰氏阴性、非运动、球状、接触酶和氧化酶阳性、兼性厌氧、粉红色着色的细菌,被命名为 CQN31 菌株,从中国云南省昌桥海湖的沉积物中分离得到。该菌在 4-45°C(最适温度 37°C)、pH6.5-9.5(最适 pH8.0)和 0-1%(w/v)NaCl(最适 0%)条件下生长。C7/C6 和 C16:0 为主要脂肪酸。主要极性脂为磷脂酰胆碱(PC)、磷脂酰乙醇胺(PE)、磷脂酰甘油(PG)、双磷脂酰甘油(DPG)、磷脂酰二甲乙醇胺(PME)和一种未鉴定的氨基脂(AL)。基因组 DNA 的 G+C 含量为 71.5%。16S rRNA 基因序列比较表明,CQN31 菌株与 JCM 19527 的相似性为 96.8%,与 EM0302 的相似性为 95.9%。CQN31 菌株与 DSM 19981、DSM 14916 和 NCTC 13291 的 DNA-DNA 杂交值分别为 21.0%、19.4%和 19.8%。CQN31 菌株与 DSM 19981、DSM 14916 和 NCTC 13291 的平均氨基酸同一性和平均核苷酸同一性值分别为 73.7%、63.4%和 61.9%,79.2%、77.1%和 77.5%。与已描述的分类群相比,CQN31 菌株在形态、生理和基因型上存在明显差异,支持其被分类为一个新种,命名为 sp. nov.。其模式菌株为 CQN31(=KCTC 62447=MCCC 1H00309)。

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