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使用基于序列遗传算法的概率细胞自动机对新冠病毒疾病动态进行数据驱动的理解。

A data-driven understanding of COVID-19 dynamics using sequential genetic algorithm based probabilistic cellular automata.

作者信息

Ghosh Sayantari, Bhattacharya Saumik

机构信息

Department of Physics, National Institute of Technology Durgapur, India.

Department of E & ECE, Indian Institute of Technology Kharagpur, India.

出版信息

Appl Soft Comput. 2020 Nov;96:106692. doi: 10.1016/j.asoc.2020.106692. Epub 2020 Aug 29.

Abstract

COVID-19 pandemic is severely impacting the lives of billions across the globe. Even after taking massive protective measures like nation-wide lockdowns, discontinuation of international flight services, rigorous testing etc., the infection spreading is still growing steadily, causing thousands of deaths and serious socio-economic crisis. Thus, the identification of the major factors of this infection spreading dynamics is becoming crucial to minimize impact and lifetime of COVID-19 and any future pandemic. In this work, a probabilistic cellular automata based method has been employed to model the infection dynamics for a significant number of different countries. This study proposes that for an accurate data-driven modelling of this infection spread, cellular automata provides an excellent platform, with a sequential genetic algorithm for efficiently estimating the parameters of the dynamics. To the best of our knowledge, this is the first attempt to understand and interpret COVID-19 data using optimized cellular automata, through genetic algorithm. It has been demonstrated that the proposed methodology can be flexible and robust at the same time, and can be used to model the daily active cases, total number of infected people and total death cases through systematic parameter estimation. Elaborate analyses for COVID-19 statistics of forty countries from different continents have been performed, with markedly divergent time evolution of the infection spreading because of demographic and socioeconomic factors. The substantial predictive power of this model has been established with conclusions on the key players in this pandemic dynamics.

摘要

新冠疫情正在严重影响全球数十亿人的生活。即便采取了诸如全国范围封锁、停飞国际航班、严格检测等大规模防护措施,感染传播仍在稳步增长,导致数千人死亡,并引发严重的社会经济危机。因此,确定这种感染传播动态的主要因素对于将新冠疫情及未来任何大流行的影响和持续时间降至最低至关重要。在这项工作中,一种基于概率细胞自动机的方法被用于对大量不同国家的感染动态进行建模。本研究提出,对于这种感染传播的精确数据驱动建模,细胞自动机提供了一个极佳的平台,并结合一种顺序遗传算法来有效估计动态参数。据我们所知,这是首次尝试通过遗传算法利用优化的细胞自动机来理解和解读新冠数据。结果表明,所提出的方法可以同时具备灵活性和稳健性,并且可以通过系统的参数估计来对每日新增病例、感染总人数和死亡总病例进行建模。针对来自不同大陆的40个国家的新冠统计数据进行了详尽分析,由于人口和社会经济因素,感染传播的时间演变存在显著差异。该模型的强大预测能力已得到确立,并得出了有关这场大流行动态中的关键因素的结论。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aea1/7455552/156eb30c4578/gr1_lrg.jpg

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