Faculty of Chemistry, University of Wroclaw, 14 F. Joliot-Curie St, 50383 Wroclaw, Poland.
Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 12 R. Weigl St, 53114 Wroclaw, Poland.
Molecules. 2020 Sep 24;25(19):4392. doi: 10.3390/molecules25194392.
For the first time, we are introducing TTPBgp12 and TFPgp17 as new members of the tail tubular proteins B (TTPB) and tail fiber proteins (TFP) family, respectively. These proteins originate from phage φYeO3-12. It was originally thought that these were structural proteins. However, our results show that they also inhibit bacterial growth and biofilm formation. According to the bioinformatic analysis, TTPBgp12 is functionally and structurally similar to the TTP of phage T7 and adopts a β-structure. TFPgp17 contains an intramolecular chaperone domain at its C-terminal end. The N-terminus of TFPgp17 is similar to other representatives of the TFP family. Interestingly, the predicted 3D structure of TFPgp17 is similar to other bacterial S-layer proteins. Based on the thermal unfolding experiment, TTPBgp12 seems to be a two-domain protein that aggregates in the presence of sugars such as maltose and N-acetylglucosamine (GlcNAc). These sugars cause two unfolding events to transition into one global event. TFPgp17 is a one-domain protein. Maltose and GlcNAc decrease the aggregation temperature of TFPgp17, while the presence of N-acetylgalactosamine (GalNAc) increases the temperature of its aggregation. The thermal unfolding analysis of the concentration gradient of TTPBgp12 and TFPgp17 indicates that with decreasing concentrations, both proteins increase in stability. However, a decrease in the protein concentration also causes an increase in its aggregation, for both TTPBgp12 and TFPgp17.
我们首次将 TTPBgp12 和 TFPgp17 分别鉴定为尾管蛋白 B(TTPB)和尾丝蛋白(TFP)家族的新成员。这些蛋白来源于噬菌体 φYeO3-12。最初认为这些蛋白是结构蛋白,但我们的结果表明它们还能抑制细菌生长和生物膜形成。根据生物信息学分析,TTPBgp12 在功能和结构上与噬菌体 T7 的 TTP 相似,采用 β-结构。TFPgp17 的 C 末端含有分子内伴侣结构域。TFPgp17 的 N 末端与 TFP 家族的其他代表相似。有趣的是,TFPgp17 的预测 3D 结构与其他细菌 S-层蛋白相似。基于热变性实验,TTPBgp12 似乎是一种二结构域蛋白,在麦芽糖和 N-乙酰葡萄糖胺(GlcNAc)等糖存在下聚集。这些糖导致两个展开事件转变为一个全局事件。TFPgp17 是一种单结构域蛋白。麦芽糖和 GlcNAc 降低了 TFPgp17 的聚集温度,而 N-乙酰半乳糖胺(GalNAc)的存在则增加了其聚集温度。TTPBgp12 和 TFPgp17 浓度梯度的热变性分析表明,随着浓度降低,两种蛋白的稳定性均增加。然而,蛋白质浓度的降低也会增加其聚集,对于 TTPBgp12 和 TFPgp17 都是如此。