Division of Genetics and Epidemiology, The Institute of Cancer Research, London, SW7 3RP, UK.
Br J Cancer. 2021 Jan;124(2):447-454. doi: 10.1038/s41416-020-01083-1. Epub 2020 Oct 6.
The aetiology of glioma is poorly understood. Summary data from genome-wide association studies (GWAS) can be used in a Mendelian randomisation (MR) phenome-wide association study (PheWAS) to search for glioma risk factors.
We performed an MR-PheWAS analysing 316 phenotypes, proxied by 8387 genetic variants, and summary genetic data from a GWAS of 12,488 glioma cases and 18,169 controls. Causal effects were estimated under a random-effects inverse-variance-weighted (IVW-RE) model, with robust adjusted profile score (MR-RAPS), weighted median and mode-based estimates computed to assess the robustness of findings. Odds ratios per one standard deviation increase in each phenotype were calculated for all glioma, glioblastoma (GBM) and non-GBM tumours.
No significant associations (P < 1.58 × 10) were observed between phenotypes and glioma under the IVW-RE model. Suggestive associations (1.58 × 10 < P < 0.05) were observed between leukocyte telomere length (LTL) with all glioma (OR = 3.91, P = 9.24 × 10) and GBM (OR = 4.86, P = 3.23 × 10), but the association was primarily driven by the TERT variant rs2736100. Serum low-density lipoprotein cholesterol and plasma HbA1C showed suggestive associations with glioma (OR = 1.11, P = 1.39 × 10 and OR = 1.28, P = 1.73 × 10, respectively), both associations being reliant on single genetic variants.
Our study provides further insight into the aetiological basis of glioma for which published data have been mixed.
胶质母细胞瘤的病因尚不清楚。全基因组关联研究(GWAS)的汇总数据可用于孟德尔随机化(MR)表型全基因组关联研究(PheWAS),以寻找胶质母细胞瘤的风险因素。
我们进行了一项 MR-PheWAS 分析,分析了 316 种表型,这些表型由 8387 个遗传变异体所代表,并使用了 12488 例胶质母细胞瘤病例和 18169 例对照的 GWAS 汇总遗传数据。在随机效应逆方差加权(IVW-RE)模型下估计因果效应,并计算稳健调整的轮廓得分(MR-RAPS)、加权中位数和基于模式的估计值,以评估研究结果的稳健性。计算每个表型每增加一个标准差的比值比(OR),用于所有胶质母细胞瘤、胶质母细胞瘤(GBM)和非 GBM 肿瘤。
在 IVW-RE 模型下,没有观察到表型与胶质母细胞瘤之间存在显著关联(P < 1.58×10)。在白细胞端粒长度(LTL)与所有胶质母细胞瘤(OR = 3.91,P = 9.24×10)和 GBM(OR = 4.86,P = 3.23×10)之间观察到提示性关联,但该关联主要由 TERT 变体 rs2736100 驱动。血清低密度脂蛋白胆固醇和血浆 HbA1C 与胶质母细胞瘤呈提示性关联(OR = 1.11,P = 1.39×10 和 OR = 1.28,P = 1.73×10),这两个关联都依赖于单个遗传变异体。
我们的研究为胶质母细胞瘤的病因学基础提供了进一步的见解,因为已发表的数据存在差异。