School of Biological Sciences, Monash University, Monash, VIC 3800, Australia.
Biomedical Discovery Institute, Monash University, Monash, VIC 3800, Australia.
Proc Natl Acad Sci U S A. 2020 Oct 27;117(43):26868-26875. doi: 10.1073/pnas.2005331117. Epub 2020 Oct 14.
Horizontal gene transfer (HGT) confers the rapid acquisition of novel traits and is pervasive throughout microbial evolution. Despite the central role of HGT, the evolutionary forces that drive the dynamics of HGT alleles in evolving populations are poorly understood. Here, we show that HGT alters the evolutionary dynamics of genetic variation, so that deleterious genetic variants, including antibiotic resistance genes, can establish in populations without selection. We evolve antibiotic-sensitive populations of the human pathogen in an environment without antibiotic but with HGT from an antibiotic-resistant isolate of We find that HGT increases the rate of adaptation, with most horizontally transferred genetic variants establishing at a low frequency in the population. When challenged with antibiotic, this low-level variation potentiates adaptation, with HGT populations flourishing in conditions where nonpotentiated populations go extinct. By extending previous models of evolution under HGT, we evaluated the conditions for the establishment and spread of HGT-acquired alleles into recipient populations. We then used our model to estimate parameters of HGT and selection from our experimental evolution data. Together, our findings show how HGT can act as an evolutionary force that facilitates the spread of nonselected genetic variation and expands the adaptive potential of microbial populations.
水平基因转移(HGT)赋予了微生物快速获得新性状的能力,并且在微生物进化中普遍存在。尽管 HGT 具有核心作用,但驱动进化群体中 HGT 等位基因动态的进化力量仍知之甚少。在这里,我们表明 HGT 改变了遗传变异的进化动态,使得有害的遗传变异,包括抗生素抗性基因,在没有选择的情况下也能在种群中建立。我们在没有抗生素但有 HGT 的环境中进化人类病原体 的抗生素敏感种群,来自抗生素抗性的 分离株。我们发现 HGT 增加了适应性的速度,大多数水平转移的遗传变异以低频率在种群中建立。当受到抗生素的挑战时,这种低水平的变异会增强适应性,而没有增强的种群灭绝的情况下,HGT 种群会蓬勃发展。通过扩展之前的 HGT 进化模型,我们评估了 HGT 获得的等位基因在受体种群中建立和传播的条件。然后,我们使用我们的模型从我们的实验进化数据中估计 HGT 和选择的参数。总的来说,我们的研究结果表明,HGT 如何作为一种进化力量,促进非选择遗传变异的传播,并扩大微生物种群的适应潜力。