Laboratory of Geographic Information Systems (LASIG), School of Architecture, Civil and Environmental Engineering (ENAC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
La Source School of Nursing, University of Applied Sciences and Arts Western Switzerland (HES-SO), Lausanne, Switzerland.
Appl Environ Microbiol. 2020 Dec 17;87(1). doi: 10.1128/AEM.01237-20.
The tick is the vector of various pathogens, including bacteria, which potentially cause respiratory infections. In this study, we modeled the spatial distribution of and associated over Switzerland from 2009 to 2019. We used a total of 2,293 ticks and 186 occurrences provided by a Swiss Army field campaign, a collaborative smartphone application, and a prospective campaign. For each tick location, we retrieved from Swiss federal data sets the environmental factors reflecting the topography, climate, and land cover. We then used the Maxent modeling technique to estimate the suitability of particular areas for and to subsequently build the nested niche of bacteria. Results indicate that habitat suitability is determined by higher temperature and normalized difference vegetation index (NDVI) values, lower temperature during the driest months, and a higher percentage of artificial and forest areas. The performance of the model was improved when extracting the environmental variables for a 100-m radius buffer around the sampling points and when considering the climatic conditions of the 2 years previous to the sampling date. bacteria were favored by a lower percentage of artificial surfaces, drier conditions, high precipitation during the coldest months, and short distances to wetlands. From 2009 to 2018, we observed an extension of areas suitable to ticks and , associated with a shift toward higher altitude. The importance of considering spatiotemporal variations in the environmental conditions for obtaining better prediction was also demonstrated. is the vector of pathogens including the agent of Lyme disease, the tick-borne encephalitis virus, and the less well-known bacteria, which are responsible for certain respiratory infections. In this study, we identified the environmental factors influencing the presence of and in Switzerland and generated maps of their distribution from 2009 to 2018. We found an important expansion of suitable areas for both the tick and the bacteria during the last decade. Results also provided the environmental factors that determine the presence of within ticks. Distribution maps as generated here are expected to bring valuable information for decision makers in controlling tick-borne diseases in Switzerland and establishing prevention campaigns. The methodological framework presented could be used to predict the distribution and spread of other host-pathogen pairs to identify environmental factors driving their distribution and to develop control or prevention strategies accordingly.
蜱虫是多种病原体的载体,包括细菌,这些细菌可能导致呼吸道感染。在这项研究中,我们模拟了 2009 年至 2019 年瑞士的 tick 和相关细菌的空间分布。我们总共使用了 2293 只蜱虫和 186 个 tick 发生地点,这些地点来自瑞士军队实地考察、协作智能手机应用程序和前瞻性考察。对于每个 tick 位置,我们从瑞士联邦数据集检索反映地形、气候和土地覆盖的环境因素。然后,我们使用最大熵建模技术来估计特定区域对 tick 的适宜性,并随后构建细菌的嵌套生态位。结果表明,tick 栖息地的适宜性由较高的温度和归一化差异植被指数(NDVI)值、最干燥月份较低的温度以及较高的人工和森林面积百分比决定。当从采样点周围提取 100 米半径缓冲区的环境变量并考虑采样日期前两年的气候条件时,模型的性能得到了提高。细菌受较低的人工表面百分比、较干燥的条件、最冷月份的高降水以及与湿地的短距离的影响。从 2009 年到 2018 年,我们观察到 tick 和 tick 相关细菌的适宜区域扩大,与海拔升高有关。还证明了考虑环境条件的时空变化对获得更好预测的重要性。蜱虫是包括莱姆病病原体、蜱传脑炎病毒和鲜为人知的 tick 细菌在内的病原体的载体,这些 tick 细菌会导致某些呼吸道感染。在这项研究中,我们确定了影响 tick 和 tick 细菌在瑞士存在的环境因素,并生成了 2009 年至 2018 年期间它们分布的地图。我们发现,在过去十年中, tick 和 tick 细菌的适宜区域都有了重要的扩展。结果还提供了确定 tick 内 tick 细菌存在的环境因素。这里生成的分布地图预计将为瑞士 tick 传播疾病的控制和预防活动提供有价值的信息。提出的方法框架可用于预测其他宿主-病原体对的分布和传播,以确定驱动其分布的环境因素,并相应地制定控制或预防策略。