Department of Biomedical and Biotechnological Sciences, Section of Biology and Genetics G. Sichel, University of Catania, 95123 Catania, Italy.
Department of Experimental and Clinical Medicine, Magna Graecia University, 88100 Catanzaro, Italy.
Int J Mol Sci. 2020 Oct 15;21(20):7644. doi: 10.3390/ijms21207644.
Alzheimer's disease (AD) diagnosis is actually based on clinical evaluation and brain-imaging tests, and it can often be confirmed only post-mortem. Therefore, new non-invasive molecular biomarkers are necessary to improve AD diagnosis. As circulating microRNA biomarkers have been proposed for many diseases, including AD, we aimed to identify new diagnostic non-small RNAs in AD. Whole transcriptome analysis was performed on plasma samples of five AD and five unaffected individuals (CTRL) using the Clariom D Pico Assay, followed by validation in real-time PCR on 37 AD patients and 37 CTRL. Six differentially expressed (DE) transcripts were identified: GS1-304P7.3 (upregulated), NONHSAT090268, TC0100011037, TC0400008478, TC1400008125, and (downregulated). Peripheral blood mononuclear cells (PBMCs) may influence the expression of circulating RNAs and their analysis has been proposed to improve AD clinical management. Accordingly, DE transcript expression was also evaluated in PBMCs, showing no difference between AD and CTRL. ROC (receiver operating characteristic) curve analysis was performed to evaluate the diagnostic accuracy of each DE transcript and a signature including all of them. A correlation between cognitive impairment and GS1-304P7.3, NONHSAT090268, TC0100011037, and TC0400008478 was detected, suggesting a potential association between their extracellular abundance and AD clinical phenotype. Finally, this study identified six transcripts showing altered expression in the plasma of AD patients. Given the need for new, accurate blood biomarkers for AD diagnosis, these transcripts may be considered for further analyses in larger cohorts, also in combination with other biomarkers, aiming to identify specific RNA-based biomarkers to be eventually applied to clinical practice.
阿尔茨海默病(AD)的诊断实际上基于临床评估和脑部成像测试,并且通常只能在死后才能确诊。因此,需要新的非侵入性分子生物标志物来改善 AD 的诊断。由于循环 microRNA 生物标志物已被提出用于许多疾病,包括 AD,我们旨在鉴定 AD 中的新诊断性非小 RNA。使用 Clariom D Pico 检测试剂盒对 5 名 AD 患者和 5 名无影响个体(CTRL)的血浆样本进行全转录组分析,随后在 37 名 AD 患者和 37 名 CTRL 中进行实时 PCR 验证。鉴定出 6 个差异表达(DE)的转录本:GS1-304P7.3(上调)、NONHSAT090268、TC0100011037、TC0400008478、TC1400008125 和 (下调)。外周血单核细胞(PBMCs)可能会影响循环 RNA 的表达,并且已经提出对其进行分析以改善 AD 的临床管理。因此,还评估了 AD 和 CTRL 中 PBMCs 中 DE 转录本的表达,未发现差异。进行了 ROC(接收者操作特征)曲线分析,以评估每个 DE 转录本和包含所有转录本的特征的诊断准确性。检测到认知障碍与 GS1-304P7.3、NONHSAT090268、TC0100011037 和 TC0400008478 之间的相关性,表明它们在细胞外丰度与 AD 临床表型之间存在潜在关联。最后,本研究鉴定了在 AD 患者血浆中表达改变的 6 个转录本。鉴于需要新的、准确的 AD 诊断血液生物标志物,这些转录本可能会在更大的队列中进行进一步分析,也可能与其他生物标志物结合,旨在确定特定的基于 RNA 的生物标志物,最终应用于临床实践。