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儿童急性胃肠炎中腺病毒的临床流行病学及分子归因评估:一项病例对照研究

A Clinical Epidemiology and Molecular Attribution Evaluation of Adenoviruses in Pediatric Acute Gastroenteritis: a Case-Control Study.

作者信息

Pabbaraju Kanti, Tellier Raymond, Pang Xiao-Li, Xie Jianling, Lee Bonita E, Chui Linda, Zhuo Ran, Vanderkooi Otto G, Ali Samina, Tarr Phillip I, Funk Anna, Freedman Stephen B

机构信息

Alberta Precision Laboratories, Public Health Laboratory, Calgary, Alberta, Canada.

Department of Medicine, McGill University Health Centre, Montreal, Quebec, Canada.

出版信息

J Clin Microbiol. 2020 Dec 17;59(1). doi: 10.1128/JCM.02287-20.

DOI:
10.1128/JCM.02287-20
PMID:33115841
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7771432/
Abstract

The objective of this study was to characterize the etiological role of human adenovirus (HAdV) serotypes in pediatric gastroenteritis. Using a case-control design, we compared the frequencies of HAdV serotypes between children with ≥3 episodes of vomiting or diarrhea within 24 h and <7 days of symptoms (i.e., cases) and those with no infectious symptoms (i.e., controls). Stool samples and/or rectal swabs underwent molecular serotyping with cycle threshold (Ct) values provided by multiplex real-time reverse transcription-PCR testing. Cases without respiratory symptoms were analyzed to calculate the proportion of disease attributed to individual HAdV serotypes (i.e., attributable fraction). Between December 2014 and August 2018, adenoviruses were detected in 18.8% (629/3,347) of cases and 7.2% (97/1,355) of controls, a difference of 11.6% (95% confidence interval [CI], 9.6%, 13.5%). In 96% (95% CI, 92 to 98%) of HAdV F40/41 detections, the symptoms could be attributed to the identified serotype; when serotypes C1, C2, C5, and C6 were detected, they were responsible for symptoms in 52% (95% CI, 12 to 73%). Ct values were lower among cases than among controls ( < 0.001). HAdV F40/41, C2, and C1 accounted for 59.7% (279/467), 17.6% (82/467), and 12.0% (56/467) of all typed cases, respectively. Among cases, Ct values were lower for F40/41 serotypes than for non-F40/41 serotypes ( < 0.001). HAdV F40/41 serotypes account for the majority of HAdV-positive gastroenteritis cases, and when detected, disease is almost always attributed to infection with these pathogens. Non-F40/41 HAdV species have a higher frequency of asymptomatic infection and may not necessarily explain gastroenteritis symptoms. Real-time quantitative PCR may be useful in differentiating asymptomatic shedding from active infection.

摘要

本研究的目的是确定人类腺病毒(HAdV)血清型在小儿胃肠炎中的病因学作用。采用病例对照设计,我们比较了在24小时内出现≥3次呕吐或腹泻且症状持续<7天的儿童(即病例)与无感染症状的儿童(即对照)之间HAdV血清型的频率。粪便样本和/或直肠拭子通过多重实时逆转录PCR检测提供的循环阈值(Ct)值进行分子血清分型。对无呼吸道症状的病例进行分析,以计算归因于个体HAdV血清型的疾病比例(即可归因分数)。在2014年12月至2018年8月期间,18.8%(629/3347)的病例和7.2%(97/1355)的对照中检测到腺病毒,差异为11.6%(95%置信区间[CI],9.6%,13.5%)。在96%(95%CI,92%至98%)的HAdV F40/41检测中,症状可归因于所鉴定的血清型;当检测到C1、C2、C5和C6血清型时,它们导致了52%(95%CI,12%至73%)的症状。病例组的Ct值低于对照组(<0.001)。HAdV F40/41、C2和C1分别占所有分型病例的59.7%(279/467)、17.6%(82/467)和12.0%(56/467)。在病例组中,F40/41血清型的Ct值低于非F40/41血清型(<0.001)。HAdV F40/41血清型占HAdV阳性胃肠炎病例的大多数,一旦检测到,疾病几乎总是归因于这些病原体的感染。非F40/41 HAdV种类无症状感染的频率较高,不一定能解释胃肠炎症状。实时定量PCR可能有助于区分无症状排毒和活动性感染。