Suppr超能文献

如果你摄入它,或者分泌它,它们就会生长:人类肠道细菌利用的营养物质清单不断扩大。

If you eat it, or secrete it, they will grow: the expanding list of nutrients utilized by human gut bacteria.

作者信息

Glowacki Robert W P, Martens Eric C

机构信息

Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, USA.

出版信息

J Bacteriol. 2020 Nov 9;203(9). doi: 10.1128/JB.00481-20.

Abstract

In order to persist, successful bacterial inhabitants of the human gut need to adapt to changing nutrient conditions, which are influenced by host diet and a variety of other factors. For members of the Bacteroidetes and several other phyla, this has resulted in diversification of a variety of enzyme-based systems that equip them to sense and utilize carbohydrate-based nutrients from host, diet, and bacterial origin. In this review, we focus first on human gut and describe recent findings regarding polysaccharide utilization loci (PULs) and the mechanisms of the multi-protein systems they encode, including their regulation and the expanding diversity of substrates that they target. Next, we highlight previously understudied substrates such as monosaccharides, nucleosides, and Maillard reaction products that can also affect the gut microbiota by feeding symbionts that possess specific systems for their metabolism. Since some pathogens preferentially utilize these nutrients, they may represent nutrient niches competed for by commensals and pathogens. Finally, we address recent work to describe nutrient acquisition mechanisms in other important gut species such as those belonging to the Gram-positive anaerobic phyla and , as well as the Because gut bacteria contribute to many aspects of health and disease, we showcase advances in the field of synthetic biology, which seeks to engineer novel, diet-controlled nutrient utilization pathways within gut symbionts to create rationally designed live therapeutics.

摘要

为了生存下去,人类肠道中的成功细菌居民需要适应不断变化的营养条件,这些条件受宿主饮食和多种其他因素影响。对于拟杆菌门和其他几个门的成员来说,这导致了各种基于酶的系统的多样化,使它们能够感知和利用来自宿主、饮食和细菌来源的碳水化合物类营养物质。在这篇综述中,我们首先聚焦于人类肠道,并描述关于多糖利用位点(PULs)及其编码的多蛋白系统机制的最新发现,包括它们的调控以及它们所靶向底物的不断扩大的多样性。接下来,我们强调以前研究较少的底物,如单糖、核苷和美拉德反应产物,它们也可以通过为具有特定代谢系统的共生菌提供养分来影响肠道微生物群。由于一些病原体优先利用这些营养物质,它们可能代表共生菌和病原体竞争的营养生态位。最后,我们阐述了最近的研究工作,以描述其他重要肠道物种(如属于革兰氏阳性厌氧门的物种以及……)中的营养获取机制,以及……因为肠道细菌在健康和疾病的许多方面都发挥作用,我们展示了合成生物学领域的进展,该领域旨在设计肠道共生菌中新型的、受饮食控制的营养利用途径,以创造经过合理设计的活疗法。

相似文献

2
Cultivable, Host-Specific Symbionts Exhibit Diverse Polysaccharolytic Strategies.
Appl Environ Microbiol. 2020 Apr 1;86(8). doi: 10.1128/AEM.00091-20.
4
Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts.
PLoS Biol. 2011 Dec;9(12):e1001221. doi: 10.1371/journal.pbio.1001221. Epub 2011 Dec 20.
5
A Novel Family of RNA-Binding Proteins Regulate Polysaccharide Metabolism in .
J Bacteriol. 2021 Oct 12;203(21):e0021721. doi: 10.1128/JB.00217-21. Epub 2021 Jul 12.
6
metabolic activity decreases with polysaccharide molecular weight.
mBio. 2024 Mar 13;15(3):e0259923. doi: 10.1128/mbio.02599-23. Epub 2024 Feb 20.
7
The Roles of Inflammation, Nutrient Availability and the Commensal Microbiota in Enteric Pathogen Infection.
Microbiol Spectr. 2015 Jun;3(3). doi: 10.1128/microbiolspec.MBP-0008-2014.
8
Loss of bile acid altering enzymes impact bacterial fitness and the global metabolic transcriptome.
bioRxiv. 2023 Jun 27:2023.06.27.546749. doi: 10.1101/2023.06.27.546749.
9
Symbiotic Human Gut Bacteria with Variable Metabolic Priorities for Host Mucosal Glycans.
mBio. 2015 Nov 10;6(6):e01282-15. doi: 10.1128/mBio.01282-15.
10
Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla.
Proc Natl Acad Sci U S A. 2009 Apr 7;106(14):5859-64. doi: 10.1073/pnas.0901529106. Epub 2009 Mar 24.

引用本文的文献

1
Meal-Induced Changes in Rat Gut Microbiota: Microbiological and Metagenomic Findings.
Int J Mol Sci. 2025 Sep 5;26(17):8663. doi: 10.3390/ijms26178663.
3
Microbiota-gut-brain axis in binge-eating disorder: Towards microbiome-based therapies.
Neurosci Appl. 2024 Aug 29;3:104088. doi: 10.1016/j.nsa.2024.104088. eCollection 2024.
4
Cross-feeding interactions between and the glycan forager .
bioRxiv. 2025 Jun 19:2025.06.18.660387. doi: 10.1101/2025.06.18.660387.
7
Sulfoglycolysis sustains Eubacterium rectale in low-fiber diets.
J Biol Chem. 2025 Mar;301(3):108320. doi: 10.1016/j.jbc.2025.108320. Epub 2025 Feb 14.
8
Cecal microbial composition and serum concentration of short-chain fatty acids in laying hens fed different fiber sources.
Braz J Microbiol. 2025 Mar;56(1):709-722. doi: 10.1007/s42770-024-01606-5. Epub 2025 Jan 13.
10
Determinants of raffinose family oligosaccharide use in species.
J Bacteriol. 2024 Oct 24;206(10):e0023524. doi: 10.1128/jb.00235-24. Epub 2024 Sep 27.

本文引用的文献

1
Dietary simple sugars alter microbial ecology in the gut and promote colitis in mice.
Sci Transl Med. 2020 Oct 28;12(567). doi: 10.1126/scitranslmed.aay6218.
2
Environmental and Intestinal Phylum Bacteria Metabolize the Plant Sugar Sulfoquinovose via a 6-Deoxy-6-sulfofructose Transaldolase Pathway.
iScience. 2020 Aug 28;23(9):101510. doi: 10.1016/j.isci.2020.101510. eCollection 2020 Sep 25.
5
Utilization of xylan-type polysaccharides in co-culture fermentations of Bifidobacterium and Bacteroides species.
Carbohydr Polym. 2020 May 15;236:116076. doi: 10.1016/j.carbpol.2020.116076. Epub 2020 Feb 26.
6
A Metabolic Pathway for Activation of Dietary Glucosinolates by a Human Gut Symbiont.
Cell. 2020 Feb 20;180(4):717-728.e19. doi: 10.1016/j.cell.2020.01.023.
7
Structural basis of mammalian high-mannose N-glycan processing by human gut Bacteroides.
Nat Commun. 2020 Feb 14;11(1):899. doi: 10.1038/s41467-020-14754-7.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验