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基于深度学习的新冠肺炎胸部X光片分类:新模型还是微调?

Classification of COVID-19 chest X-rays with deep learning: new models or fine tuning?

作者信息

Pham Tuan D

机构信息

Center for Artificial Intelligence, Prince Mohammad Bin Fahd University, Khobar, 31952 Saudi Arabia.

出版信息

Health Inf Sci Syst. 2020 Nov 22;9(1):2. doi: 10.1007/s13755-020-00135-3. eCollection 2021 Dec.


DOI:10.1007/s13755-020-00135-3
PMID:33235710
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7680558/
Abstract

BACKGROUND AND OBJECTIVES: Chest X-ray data have been found to be very promising for assessing COVID-19 patients, especially for resolving emergency-department and urgent-care-center overcapacity. Deep-learning (DL) methods in artificial intelligence (AI) play a dominant role as high-performance classifiers in the detection of the disease using chest X-rays. Given many new DL models have been being developed for this purpose, the objective of this study is to investigate the fine tuning of pretrained convolutional neural networks (CNNs) for the classification of COVID-19 using chest X-rays. If fine-tuned pre-trained CNNs can provide equivalent or better classification results than other more sophisticated CNNs, then the deployment of AI-based tools for detecting COVID-19 using chest X-ray data can be more rapid and cost-effective. METHODS: Three pretrained CNNs, which are AlexNet, GoogleNet, and SqueezeNet, were selected and fine-tuned without data augmentation to carry out 2-class and 3-class classification tasks using 3 public chest X-ray databases. RESULTS: In comparison with other recently developed DL models, the 3 pretrained CNNs achieved very high classification results in terms of accuracy, sensitivity, specificity, precision, score, and area under the receiver-operating-characteristic curve. CONCLUSION: AlexNet, GoogleNet, and SqueezeNet require the least training time among pretrained DL models, but with suitable selection of training parameters, excellent classification results can be achieved without data augmentation by these networks. The findings contribute to the urgent need for harnessing the pandemic by facilitating the deployment of AI tools that are fully automated and readily available in the public domain for rapid implementation.

摘要

背景与目的:胸部X光数据已被证明在评估新冠肺炎患者方面很有前景,特别是对于缓解急诊科和紧急护理中心的容量过载问题。人工智能(AI)中的深度学习(DL)方法在利用胸部X光检测该疾病时作为高性能分类器发挥着主导作用。鉴于许多新的DL模型正为此目的而不断开发,本研究的目的是调查使用胸部X光对新冠肺炎进行分类时预训练卷积神经网络(CNN)的微调情况。如果微调后的预训练CNN能够提供与其他更复杂的CNN相当或更好的分类结果,那么使用胸部X光数据检测新冠肺炎的基于AI的工具的部署可以更加迅速且具有成本效益。 方法:选择了三个预训练的CNN,即AlexNet、GoogleNet和SqueezeNet,并在不进行数据增强的情况下进行微调,以使用3个公共胸部X光数据库执行二分类和三分类任务。 结果:与其他最近开发的DL模型相比,这三个预训练的CNN在准确性、敏感性、特异性、精确率、F1分数和受试者工作特征曲线下面积方面取得了非常高的分类结果。 结论:在预训练的DL模型中,AlexNet、GoogleNet和SqueezeNet所需的训练时间最少,但通过合理选择训练参数,这些网络在不进行数据增强的情况下也能取得优异的分类结果。这些发现有助于满足通过促进在公共领域中完全自动化且随时可用的AI工具的部署来应对疫情的迫切需求,以便能够快速实施。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4ab/7680818/f09d134d29fe/13755_2020_135_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4ab/7680818/9b8fa88c4398/13755_2020_135_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4ab/7680818/8b0770fd5d4b/13755_2020_135_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4ab/7680818/013640a30a9e/13755_2020_135_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4ab/7680818/8611a4aaead6/13755_2020_135_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4ab/7680818/f09d134d29fe/13755_2020_135_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4ab/7680818/9b8fa88c4398/13755_2020_135_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4ab/7680818/8b0770fd5d4b/13755_2020_135_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4ab/7680818/013640a30a9e/13755_2020_135_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4ab/7680818/8611a4aaead6/13755_2020_135_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4ab/7680818/f09d134d29fe/13755_2020_135_Fig5_HTML.jpg

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[7]
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[9]
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[10]
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本文引用的文献

[1]
CovidGAN: Data Augmentation Using Auxiliary Classifier GAN for Improved Covid-19 Detection.

IEEE Access. 2020-5-14

[2]
How Might AI and Chest Imaging Help Unravel COVID-19's Mysteries?

Radiol Artif Intell. 2020-5-6

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Refining dataset curation methods for deep learning-based automated tuberculosis screening.

J Thorac Dis. 2020-9

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Comput Biol Med. 2020-4-28

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