Tsuruyama Tatsuaki
Clinical Research Center for Medical Equipment Development, Kyoto University Hospital, Shogoin-kawahara-cho 54, Sakyo-ku, Kyoto 606-8057, Japan.
Department of Drug Discovery Medicine, Pathology Division, Graduate School of Medicine, Kyoto University, Yoshida-Konoe-cho, Sakyo-ku, Kyoto 606-8315, Japan; Tel.: +81-75-366-7694; Fax: +81-75-366-7660.
Entropy (Basel). 2018 Apr 21;20(4):303. doi: 10.3390/e20040303.
Cell signal transduction is a non-equilibrium process characterized by the reaction cascade. This study aims to quantify and compare signal transduction cascades using a model of signal transduction. The signal duration was found to be linked to step-by-step transition probability, which was determined using information theory. By applying the fluctuation theorem for reversible signal steps, the transition probability was described using the average entropy production rate. Specifically, when the signal event number during the cascade was maximized, the average entropy production rate was found to be conserved during the entire cascade. This approach provides a quantitative means of analyzing signal transduction and identifies an effective cascade for a signaling network.
细胞信号转导是一个以反应级联为特征的非平衡过程。本研究旨在使用信号转导模型对信号转导级联进行量化和比较。发现信号持续时间与逐步跃迁概率相关,该概率是使用信息论确定的。通过将涨落定理应用于可逆信号步骤,跃迁概率用平均熵产生率来描述。具体而言,当级联过程中的信号事件数最大化时,发现平均熵产生率在整个级联过程中是守恒的。这种方法提供了一种分析信号转导的定量手段,并确定了信号网络的有效级联。